Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLCC1Q96S66 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLCC1Q96S66 MED16-201ENST00000269814 1199 ntTSL 5 BASIC13.86□□□□□ -0.19
CLCC1Q96S66 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLCC1Q96S66 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLCC1Q96S66 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLCC1Q96S66 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
CLCC1Q96S66 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC13.86□□□□□ -0.19
CLCC1Q96S66 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC13.86□□□□□ -0.19
CLCC1Q96S66 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC13.86□□□□□ -0.19
CLCC1Q96S66 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.86□□□□□ -0.19
CLCC1Q96S66 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLCC1Q96S66 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC13.86□□□□□ -0.19
CLCC1Q96S66 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC13.86□□□□□ -0.19
CLCC1Q96S66 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC13.86□□□□□ -0.19
CLCC1Q96S66 PRR29-207ENST00000580752 458 ntTSL 3 BASIC13.86□□□□□ -0.19
CLCC1Q96S66 GZMM-202ENST00000592501 941 ntTSL 3 BASIC13.86□□□□□ -0.19
CLCC1Q96S66 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC13.86□□□□□ -0.19
CLCC1Q96S66 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC13.86□□□□□ -0.19
CLCC1Q96S66 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC13.86□□□□□ -0.19
CLCC1Q96S66 RNF216P1-203ENST00000404404 2427 ntBASIC13.86□□□□□ -0.19
CLCC1Q96S66 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
CLCC1Q96S66 TNRC18P2-201ENST00000417666 2714 ntBASIC13.86□□□□□ -0.19
CLCC1Q96S66 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLCC1Q96S66 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CLCC1Q96S66 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
CLCC1Q96S66 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLCC1Q96S66 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLCC1Q96S66 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLCC1Q96S66 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLCC1Q96S66 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
CLCC1Q96S66 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLCC1Q96S66 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLCC1Q96S66 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC13.86□□□□□ -0.19
CLCC1Q96S66 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.86□□□□□ -0.19
CLCC1Q96S66 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CLCC1Q96S66 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CLCC1Q96S66 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CLCC1Q96S66 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLCC1Q96S66 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC13.86□□□□□ -0.19
CLCC1Q96S66 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CLCC1Q96S66 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
CLCC1Q96S66 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.85□□□□□ -0.19
CLCC1Q96S66 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CLCC1Q96S66 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLCC1Q96S66 C8orf49-201ENST00000525043 1968 ntBASIC13.85□□□□□ -0.19
CLCC1Q96S66 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLCC1Q96S66 AL135999.2-201ENST00000622438 1686 ntBASIC13.85□□□□□ -0.19
CLCC1Q96S66 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLCC1Q96S66 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLCC1Q96S66 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLCC1Q96S66 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CLCC1Q96S66 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLCC1Q96S66 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC13.85□□□□□ -0.19
CLCC1Q96S66 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLCC1Q96S66 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC13.85□□□□□ -0.19
CLCC1Q96S66 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLCC1Q96S66 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLCC1Q96S66 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CLCC1Q96S66 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLCC1Q96S66 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLCC1Q96S66 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLCC1Q96S66 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CLCC1Q96S66 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLCC1Q96S66 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLCC1Q96S66 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLCC1Q96S66 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLCC1Q96S66 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.85□□□□□ -0.19
CLCC1Q96S66 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLCC1Q96S66 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLCC1Q96S66 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLCC1Q96S66 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC13.85□□□□□ -0.19
CLCC1Q96S66 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLCC1Q96S66 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLCC1Q96S66 COX5A-202ENST00000562233 441 ntTSL 3 BASIC13.85□□□□□ -0.19
CLCC1Q96S66 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC13.85□□□□□ -0.19
CLCC1Q96S66 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC13.85□□□□□ -0.19
CLCC1Q96S66 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLCC1Q96S66 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLCC1Q96S66 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLCC1Q96S66 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.85□□□□□ -0.19
CLCC1Q96S66 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLCC1Q96S66 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLCC1Q96S66 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLCC1Q96S66 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CLCC1Q96S66 TUBB8P12-201ENST00000308911 1335 ntBASIC13.85□□□□□ -0.19
CLCC1Q96S66 TUBB7P-202ENST00000428444 1305 ntBASIC13.85□□□□□ -0.19
CLCC1Q96S66 TUBB8P7-204ENST00000567960 1332 ntBASIC13.85□□□□□ -0.19
CLCC1Q96S66 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLCC1Q96S66 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.85□□□□□ -0.19
CLCC1Q96S66 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLCC1Q96S66 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLCC1Q96S66 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLCC1Q96S66 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLCC1Q96S66 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLCC1Q96S66 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CLCC1Q96S66 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.84□□□□□ -0.19
CLCC1Q96S66 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLCC1Q96S66 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CLCC1Q96S66 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms