Protein–RNA interactions for Protein: Q96RV3

PCNX1, Pecanex-like protein 1, humanhuman

Predictions only

Length 2,341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1Q96RV3 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCNX1Q96RV3 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCNX1Q96RV3 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC14.35□□□□□ -0.11
PCNX1Q96RV3 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCNX1Q96RV3 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.35□□□□□ -0.11
PCNX1Q96RV3 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC14.35□□□□□ -0.11
PCNX1Q96RV3 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.35□□□□□ -0.11
PCNX1Q96RV3 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
PCNX1Q96RV3 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.35□□□□□ -0.11
PCNX1Q96RV3 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
PCNX1Q96RV3 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.35□□□□□ -0.11
PCNX1Q96RV3 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
PCNX1Q96RV3 DOC2GP-202ENST00000514950 1163 ntBASIC14.35□□□□□ -0.11
PCNX1Q96RV3 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.35□□□□□ -0.11
PCNX1Q96RV3 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.35□□□□□ -0.11
PCNX1Q96RV3 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.35□□□□□ -0.11
PCNX1Q96RV3 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCNX1Q96RV3 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.35□□□□□ -0.11
PCNX1Q96RV3 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
PCNX1Q96RV3 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCNX1Q96RV3 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCNX1Q96RV3 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PCNX1Q96RV3 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCNX1Q96RV3 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PCNX1Q96RV3 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCNX1Q96RV3 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCNX1Q96RV3 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PCNX1Q96RV3 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.34□□□□□ -0.11
PCNX1Q96RV3 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCNX1Q96RV3 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCNX1Q96RV3 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCNX1Q96RV3 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
PCNX1Q96RV3 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCNX1Q96RV3 SERBP1P3-201ENST00000459980 809 ntBASIC14.34□□□□□ -0.11
PCNX1Q96RV3 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCNX1Q96RV3 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCNX1Q96RV3 MIR8072-201ENST00000614241 80 ntBASIC14.34□□□□□ -0.11
PCNX1Q96RV3 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCNX1Q96RV3 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCNX1Q96RV3 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
PCNX1Q96RV3 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCNX1Q96RV3 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCNX1Q96RV3 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
PCNX1Q96RV3 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.34□□□□□ -0.11
PCNX1Q96RV3 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCNX1Q96RV3 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.34□□□□□ -0.11
PCNX1Q96RV3 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCNX1Q96RV3 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCNX1Q96RV3 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCNX1Q96RV3 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCNX1Q96RV3 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.33□□□□□ -0.11
PCNX1Q96RV3 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.33□□□□□ -0.11
PCNX1Q96RV3 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
PCNX1Q96RV3 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.33□□□□□ -0.11
PCNX1Q96RV3 RRP7BP-205ENST00000566851 833 ntBASIC14.33□□□□□ -0.11
PCNX1Q96RV3 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
PCNX1Q96RV3 MPDU1-223ENST00000582151 728 ntBASIC14.33□□□□□ -0.11
PCNX1Q96RV3 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.33□□□□□ -0.11
PCNX1Q96RV3 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.33□□□□□ -0.11
PCNX1Q96RV3 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
PCNX1Q96RV3 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PCNX1Q96RV3 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
PCNX1Q96RV3 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PCNX1Q96RV3 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
PCNX1Q96RV3 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
PCNX1Q96RV3 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC14.33□□□□□ -0.11
PCNX1Q96RV3 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCNX1Q96RV3 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PCNX1Q96RV3 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.33□□□□□ -0.12
PCNX1Q96RV3 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCNX1Q96RV3 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCNX1Q96RV3 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCNX1Q96RV3 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCNX1Q96RV3 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.33□□□□□ -0.12
PCNX1Q96RV3 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.33□□□□□ -0.12
PCNX1Q96RV3 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC14.33□□□□□ -0.12
PCNX1Q96RV3 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
PCNX1Q96RV3 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCNX1Q96RV3 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.33□□□□□ -0.12
PCNX1Q96RV3 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.33□□□□□ -0.12
PCNX1Q96RV3 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.33□□□□□ -0.12
PCNX1Q96RV3 BCYRN1-201ENST00000418539 200 ntBASIC14.33□□□□□ -0.12
PCNX1Q96RV3 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PCNX1Q96RV3 AC004461.2-201ENST00000629517 803 ntBASIC14.33□□□□□ -0.12
PCNX1Q96RV3 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCNX1Q96RV3 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCNX1Q96RV3 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
PCNX1Q96RV3 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.33□□□□□ -0.12
PCNX1Q96RV3 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCNX1Q96RV3 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCNX1Q96RV3 AC009053.2-201ENST00000563701 2365 ntBASIC14.33□□□□□ -0.12
PCNX1Q96RV3 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCNX1Q96RV3 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
PCNX1Q96RV3 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCNX1Q96RV3 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCNX1Q96RV3 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC14.32□□□□□ -0.12
PCNX1Q96RV3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCNX1Q96RV3 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PCNX1Q96RV3 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCNX1Q96RV3 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms