Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF48Q96MX3 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF48Q96MX3 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF48Q96MX3 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
ZNF48Q96MX3 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF48Q96MX3 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.3□□□□□ -0.28
ZNF48Q96MX3 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF48Q96MX3 AC103702.1-201ENST00000548801 2630 ntBASIC13.3□□□□□ -0.28
ZNF48Q96MX3 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF48Q96MX3 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC13.3□□□□□ -0.28
ZNF48Q96MX3 AC073439.1-201ENST00000624121 1774 ntBASIC13.3□□□□□ -0.28
ZNF48Q96MX3 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF48Q96MX3 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF48Q96MX3 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC13.3□□□□□ -0.28
ZNF48Q96MX3 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF48Q96MX3 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF48Q96MX3 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF48Q96MX3 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF48Q96MX3 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
ZNF48Q96MX3 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF48Q96MX3 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF48Q96MX3 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF48Q96MX3 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF48Q96MX3 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF48Q96MX3 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.3□□□□□ -0.28
ZNF48Q96MX3 HLA-H-201ENST00000383620 1096 ntBASIC13.3□□□□□ -0.28
ZNF48Q96MX3 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
ZNF48Q96MX3 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.3□□□□□ -0.28
ZNF48Q96MX3 AP005018.1-201ENST00000525475 301 ntBASIC13.3□□□□□ -0.28
ZNF48Q96MX3 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.3□□□□□ -0.28
ZNF48Q96MX3 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF48Q96MX3 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC13.3□□□□□ -0.28
ZNF48Q96MX3 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF48Q96MX3 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC13.3□□□□□ -0.28
ZNF48Q96MX3 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
ZNF48Q96MX3 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF48Q96MX3 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF48Q96MX3 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC13.3□□□□□ -0.28
ZNF48Q96MX3 AC006277.1-201ENST00000624348 1610 ntBASIC13.3□□□□□ -0.28
ZNF48Q96MX3 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF48Q96MX3 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF48Q96MX3 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF48Q96MX3 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF48Q96MX3 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC13.3□□□□□ -0.28
ZNF48Q96MX3 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
ZNF48Q96MX3 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF48Q96MX3 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
ZNF48Q96MX3 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
ZNF48Q96MX3 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC13.29□□□□□ -0.28
ZNF48Q96MX3 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZNF48Q96MX3 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZNF48Q96MX3 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ZNF48Q96MX3 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ZNF48Q96MX3 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZNF48Q96MX3 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC13.29□□□□□ -0.28
ZNF48Q96MX3 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC13.29□□□□□ -0.28
ZNF48Q96MX3 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZNF48Q96MX3 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZNF48Q96MX3 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZNF48Q96MX3 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC13.29□□□□□ -0.28
ZNF48Q96MX3 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC13.29□□□□□ -0.28
ZNF48Q96MX3 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.29□□□□□ -0.28
ZNF48Q96MX3 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZNF48Q96MX3 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZNF48Q96MX3 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
ZNF48Q96MX3 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.29□□□□□ -0.28
ZNF48Q96MX3 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.29□□□□□ -0.28
ZNF48Q96MX3 AC244107.1-201ENST00000442033 332 ntBASIC13.29□□□□□ -0.28
ZNF48Q96MX3 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ZNF48Q96MX3 CRB3P1-201ENST00000449338 276 ntBASIC13.29□□□□□ -0.28
ZNF48Q96MX3 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.29□□□□□ -0.28
ZNF48Q96MX3 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.29□□□□□ -0.28
ZNF48Q96MX3 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ZNF48Q96MX3 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.29□□□□□ -0.28
ZNF48Q96MX3 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.29□□□□□ -0.28
ZNF48Q96MX3 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.29□□□□□ -0.28
ZNF48Q96MX3 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.29□□□□□ -0.28
ZNF48Q96MX3 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.29□□□□□ -0.28
ZNF48Q96MX3 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
ZNF48Q96MX3 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.29□□□□□ -0.28
ZNF48Q96MX3 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.29□□□□□ -0.28
ZNF48Q96MX3 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.29□□□□□ -0.28
ZNF48Q96MX3 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC13.29□□□□□ -0.28
ZNF48Q96MX3 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ZNF48Q96MX3 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZNF48Q96MX3 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZNF48Q96MX3 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC13.29□□□□□ -0.28
ZNF48Q96MX3 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ZNF48Q96MX3 AC063926.2-201ENST00000623766 1308 ntBASIC13.29□□□□□ -0.28
ZNF48Q96MX3 SNX33P1-201ENST00000592116 1762 ntBASIC13.29□□□□□ -0.28
ZNF48Q96MX3 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.29□□□□□ -0.28
ZNF48Q96MX3 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
ZNF48Q96MX3 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZNF48Q96MX3 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC13.29□□□□□ -0.28
ZNF48Q96MX3 AC007326.2-201ENST00000624224 7579 ntBASIC13.29□□□□□ -0.28
ZNF48Q96MX3 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.29□□□□□ -0.28
ZNF48Q96MX3 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC13.29□□□□□ -0.28
ZNF48Q96MX3 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZNF48Q96MX3 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
ZNF48Q96MX3 FLJ38576-201ENST00000623820 2459 ntBASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms