Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM47Q96LD4 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC19.08■□□□□ 0.64
TRIM47Q96LD4 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM47Q96LD4 NAA38-206ENST00000576384 424 ntTSL 2 BASIC19.08■□□□□ 0.64
TRIM47Q96LD4 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC19.08■□□□□ 0.64
TRIM47Q96LD4 MIR6805-201ENST00000615055 62 ntBASIC19.08■□□□□ 0.64
TRIM47Q96LD4 AP001350.2-201ENST00000625104 1094 ntBASIC19.08■□□□□ 0.64
TRIM47Q96LD4 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC19.08■□□□□ 0.64
TRIM47Q96LD4 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
TRIM47Q96LD4 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM47Q96LD4 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM47Q96LD4 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM47Q96LD4 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC19.08■□□□□ 0.64
TRIM47Q96LD4 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
TRIM47Q96LD4 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.08■□□□□ 0.64
TRIM47Q96LD4 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM47Q96LD4 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC19.08■□□□□ 0.64
TRIM47Q96LD4 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM47Q96LD4 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TRIM47Q96LD4 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
TRIM47Q96LD4 CETN4P-206ENST00000642099 2168 ntBASIC19.08■□□□□ 0.64
TRIM47Q96LD4 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.08■□□□□ 0.64
TRIM47Q96LD4 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
TRIM47Q96LD4 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM47Q96LD4 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM47Q96LD4 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM47Q96LD4 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM47Q96LD4 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC19.07■□□□□ 0.64
TRIM47Q96LD4 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
TRIM47Q96LD4 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.07■□□□□ 0.64
TRIM47Q96LD4 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
TRIM47Q96LD4 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM47Q96LD4 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM47Q96LD4 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM47Q96LD4 FLJ38576-201ENST00000623820 2459 ntBASIC19.07■□□□□ 0.64
TRIM47Q96LD4 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM47Q96LD4 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM47Q96LD4 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM47Q96LD4 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM47Q96LD4 MIR658-201ENST00000385210 100 ntBASIC19.07■□□□□ 0.64
TRIM47Q96LD4 DFFBP1-201ENST00000433250 979 ntBASIC19.07■□□□□ 0.64
TRIM47Q96LD4 MTND6P24-201ENST00000440466 518 ntBASIC19.07■□□□□ 0.64
TRIM47Q96LD4 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM47Q96LD4 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM47Q96LD4 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC19.07■□□□□ 0.64
TRIM47Q96LD4 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC19.07■□□□□ 0.64
TRIM47Q96LD4 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC19.07■□□□□ 0.64
TRIM47Q96LD4 AL589739.1-201ENST00000607720 493 ntBASIC19.07■□□□□ 0.64
TRIM47Q96LD4 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM47Q96LD4 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC19.07■□□□□ 0.64
TRIM47Q96LD4 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM47Q96LD4 AC131009.4-201ENST00000624048 1740 ntBASIC19.07■□□□□ 0.64
TRIM47Q96LD4 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC19.07■□□□□ 0.64
TRIM47Q96LD4 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM47Q96LD4 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19.07■□□□□ 0.64
TRIM47Q96LD4 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM47Q96LD4 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC19.07■□□□□ 0.64
TRIM47Q96LD4 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC19.07■□□□□ 0.64
TRIM47Q96LD4 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM47Q96LD4 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.07■□□□□ 0.64
TRIM47Q96LD4 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
TRIM47Q96LD4 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM47Q96LD4 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM47Q96LD4 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
TRIM47Q96LD4 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRIM47Q96LD4 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TRIM47Q96LD4 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
TRIM47Q96LD4 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM47Q96LD4 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM47Q96LD4 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM47Q96LD4 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
TRIM47Q96LD4 AL118508.1-201ENST00000613502 2345 ntBASIC19.06■□□□□ 0.64
TRIM47Q96LD4 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
TRIM47Q96LD4 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
TRIM47Q96LD4 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
TRIM47Q96LD4 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM47Q96LD4 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM47Q96LD4 HLA-H-201ENST00000383620 1096 ntBASIC19.06■□□□□ 0.64
TRIM47Q96LD4 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM47Q96LD4 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC19.06■□□□□ 0.64
TRIM47Q96LD4 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
TRIM47Q96LD4 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC19.06■□□□□ 0.64
TRIM47Q96LD4 AC135586.1-201ENST00000539323 574 ntBASIC19.06■□□□□ 0.64
TRIM47Q96LD4 KRT17P8-201ENST00000540749 863 ntBASIC19.06■□□□□ 0.64
TRIM47Q96LD4 AC124947.2-201ENST00000547118 1133 ntBASIC19.06■□□□□ 0.64
TRIM47Q96LD4 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC19.06■□□□□ 0.64
TRIM47Q96LD4 LITAF-210ENST00000571976 548 ntTSL 2 BASIC19.06■□□□□ 0.64
TRIM47Q96LD4 LITAF-214ENST00000574703 486 ntTSL 2 BASIC19.06■□□□□ 0.64
TRIM47Q96LD4 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC19.06■□□□□ 0.64
TRIM47Q96LD4 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC19.06■□□□□ 0.64
TRIM47Q96LD4 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
TRIM47Q96LD4 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC19.06■□□□□ 0.64
TRIM47Q96LD4 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
TRIM47Q96LD4 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC19.06■□□□□ 0.64
TRIM47Q96LD4 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
TRIM47Q96LD4 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM47Q96LD4 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRIM47Q96LD4 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.05■□□□□ 0.64
TRIM47Q96LD4 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC19.05■□□□□ 0.64
TRIM47Q96LD4 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms