Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.63■□□□□ 0.25
RTP4Q96DX8 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.63■□□□□ 0.25
RTP4Q96DX8 AC074386.1-202ENST00000463561 864 ntBASIC16.63■□□□□ 0.25
RTP4Q96DX8 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.63■□□□□ 0.25
RTP4Q96DX8 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RTP4Q96DX8 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
RTP4Q96DX8 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.63■□□□□ 0.25
RTP4Q96DX8 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.63■□□□□ 0.25
RTP4Q96DX8 AC073389.1-201ENST00000595595 795 ntBASIC16.63■□□□□ 0.25
RTP4Q96DX8 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.63■□□□□ 0.25
RTP4Q96DX8 AC099522.2-201ENST00000607001 744 ntBASIC16.63■□□□□ 0.25
RTP4Q96DX8 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.63■□□□□ 0.25
RTP4Q96DX8 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.63■□□□□ 0.25
RTP4Q96DX8 AC079781.4-201ENST00000641908 219 ntBASIC16.63■□□□□ 0.25
RTP4Q96DX8 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.63■□□□□ 0.25
RTP4Q96DX8 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RTP4Q96DX8 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTP4Q96DX8 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
RTP4Q96DX8 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
RTP4Q96DX8 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RTP4Q96DX8 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.63■□□□□ 0.25
RTP4Q96DX8 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTP4Q96DX8 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.63■□□□□ 0.25
RTP4Q96DX8 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTP4Q96DX8 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RTP4Q96DX8 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTP4Q96DX8 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTP4Q96DX8 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
RTP4Q96DX8 AC104640.1-201ENST00000562617 2109 ntBASIC16.63■□□□□ 0.25
RTP4Q96DX8 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RTP4Q96DX8 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.62■□□□□ 0.25
RTP4Q96DX8 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RTP4Q96DX8 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.62■□□□□ 0.25
RTP4Q96DX8 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTP4Q96DX8 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTP4Q96DX8 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTP4Q96DX8 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.62■□□□□ 0.25
RTP4Q96DX8 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RTP4Q96DX8 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTP4Q96DX8 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTP4Q96DX8 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
RTP4Q96DX8 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTP4Q96DX8 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.62■□□□□ 0.25
RTP4Q96DX8 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTP4Q96DX8 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTP4Q96DX8 AC002056.1-201ENST00000395613 760 ntBASIC16.62■□□□□ 0.25
RTP4Q96DX8 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.62■□□□□ 0.25
RTP4Q96DX8 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.62■□□□□ 0.25
RTP4Q96DX8 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.62■□□□□ 0.25
RTP4Q96DX8 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.62■□□□□ 0.25
RTP4Q96DX8 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.62■□□□□ 0.25
RTP4Q96DX8 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.62■□□□□ 0.25
RTP4Q96DX8 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.62■□□□□ 0.25
RTP4Q96DX8 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.62■□□□□ 0.25
RTP4Q96DX8 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
RTP4Q96DX8 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.62■□□□□ 0.25
RTP4Q96DX8 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.62■□□□□ 0.25
RTP4Q96DX8 AC134684.3-201ENST00000641758 218 ntBASIC16.62■□□□□ 0.25
RTP4Q96DX8 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTP4Q96DX8 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RTP4Q96DX8 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RTP4Q96DX8 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RTP4Q96DX8 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTP4Q96DX8 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTP4Q96DX8 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTP4Q96DX8 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTP4Q96DX8 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RTP4Q96DX8 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTP4Q96DX8 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTP4Q96DX8 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RTP4Q96DX8 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RTP4Q96DX8 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTP4Q96DX8 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RTP4Q96DX8 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.61■□□□□ 0.25
RTP4Q96DX8 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RTP4Q96DX8 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.61■□□□□ 0.25
RTP4Q96DX8 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTP4Q96DX8 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RTP4Q96DX8 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RTP4Q96DX8 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
RTP4Q96DX8 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RTP4Q96DX8 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RTP4Q96DX8 OR6D1P-203ENST00000641209 4860 ntBASIC16.61■□□□□ 0.25
RTP4Q96DX8 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTP4Q96DX8 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTP4Q96DX8 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTP4Q96DX8 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RTP4Q96DX8 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTP4Q96DX8 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RTP4Q96DX8 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.61■□□□□ 0.25
RTP4Q96DX8 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.61■□□□□ 0.25
RTP4Q96DX8 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.61■□□□□ 0.25
RTP4Q96DX8 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTP4Q96DX8 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.61■□□□□ 0.25
RTP4Q96DX8 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.61■□□□□ 0.25
RTP4Q96DX8 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.61■□□□□ 0.25
RTP4Q96DX8 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTP4Q96DX8 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RTP4Q96DX8 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.61■□□□□ 0.25
RTP4Q96DX8 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms