Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.55■□□□□ 0.4
SEMA4DQ92854 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SEMA4DQ92854 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SEMA4DQ92854 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SEMA4DQ92854 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.55■□□□□ 0.4
SEMA4DQ92854 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.55■□□□□ 0.4
SEMA4DQ92854 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.55■□□□□ 0.4
SEMA4DQ92854 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SEMA4DQ92854 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.55■□□□□ 0.4
SEMA4DQ92854 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SEMA4DQ92854 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SEMA4DQ92854 AL365203.3-201ENST00000609742 2057 ntBASIC17.55■□□□□ 0.4
SEMA4DQ92854 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SEMA4DQ92854 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SEMA4DQ92854 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.55■□□□□ 0.4
SEMA4DQ92854 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SEMA4DQ92854 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SEMA4DQ92854 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.55■□□□□ 0.4
SEMA4DQ92854 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SEMA4DQ92854 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
SEMA4DQ92854 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SEMA4DQ92854 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SEMA4DQ92854 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SEMA4DQ92854 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.54■□□□□ 0.4
SEMA4DQ92854 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.54■□□□□ 0.4
SEMA4DQ92854 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SEMA4DQ92854 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SEMA4DQ92854 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SEMA4DQ92854 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.54■□□□□ 0.4
SEMA4DQ92854 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SEMA4DQ92854 UXT-AS1-201ENST00000590504 1525 ntBASIC17.54■□□□□ 0.4
SEMA4DQ92854 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.54■□□□□ 0.4
SEMA4DQ92854 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SEMA4DQ92854 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.54■□□□□ 0.4
SEMA4DQ92854 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SEMA4DQ92854 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.54■□□□□ 0.4
SEMA4DQ92854 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SEMA4DQ92854 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.54■□□□□ 0.4
SEMA4DQ92854 IGHV3-62-201ENST00000520057 340 ntBASIC17.54■□□□□ 0.4
SEMA4DQ92854 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.54■□□□□ 0.4
SEMA4DQ92854 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.54■□□□□ 0.4
SEMA4DQ92854 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.54■□□□□ 0.4
SEMA4DQ92854 KRT8P23-201ENST00000560090 1207 ntBASIC17.54■□□□□ 0.4
SEMA4DQ92854 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.54■□□□□ 0.4
SEMA4DQ92854 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.54■□□□□ 0.4
SEMA4DQ92854 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
SEMA4DQ92854 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SEMA4DQ92854 CDC14C-201ENST00000428251 1719 ntBASIC17.54■□□□□ 0.4
SEMA4DQ92854 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.54■□□□□ 0.4
SEMA4DQ92854 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
SEMA4DQ92854 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SEMA4DQ92854 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SEMA4DQ92854 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SEMA4DQ92854 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SEMA4DQ92854 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.54■□□□□ 0.4
SEMA4DQ92854 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.54■□□□□ 0.4
SEMA4DQ92854 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SEMA4DQ92854 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SEMA4DQ92854 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.53■□□□□ 0.4
SEMA4DQ92854 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SEMA4DQ92854 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SEMA4DQ92854 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.53■□□□□ 0.4
SEMA4DQ92854 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
SEMA4DQ92854 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SEMA4DQ92854 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SEMA4DQ92854 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SEMA4DQ92854 AC008894.3-201ENST00000624324 3103 ntBASIC17.53■□□□□ 0.4
SEMA4DQ92854 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
SEMA4DQ92854 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SEMA4DQ92854 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SEMA4DQ92854 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SEMA4DQ92854 AC211486.1-202ENST00000416371 468 ntBASIC17.53■□□□□ 0.4
SEMA4DQ92854 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SEMA4DQ92854 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.53■□□□□ 0.4
SEMA4DQ92854 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SEMA4DQ92854 AC211476.1-201ENST00000503899 468 ntBASIC17.53■□□□□ 0.4
SEMA4DQ92854 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.53■□□□□ 0.4
SEMA4DQ92854 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SEMA4DQ92854 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.53■□□□□ 0.4
SEMA4DQ92854 AC061975.2-201ENST00000581722 295 ntBASIC17.53■□□□□ 0.4
SEMA4DQ92854 MIR4321-201ENST00000592276 80 ntBASIC17.53■□□□□ 0.4
SEMA4DQ92854 AC023511.2-201ENST00000618803 211 ntBASIC17.53■□□□□ 0.4
SEMA4DQ92854 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.53■□□□□ 0.4
SEMA4DQ92854 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SEMA4DQ92854 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SEMA4DQ92854 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SEMA4DQ92854 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SEMA4DQ92854 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.53■□□□□ 0.4
SEMA4DQ92854 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.53■□□□□ 0.4
SEMA4DQ92854 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SEMA4DQ92854 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SEMA4DQ92854 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
SEMA4DQ92854 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SEMA4DQ92854 AC069224.1-201ENST00000566372 1715 ntBASIC17.52■□□□□ 0.4
SEMA4DQ92854 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SEMA4DQ92854 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SEMA4DQ92854 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SEMA4DQ92854 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SEMA4DQ92854 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SEMA4DQ92854 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms