Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDRT4Q8N9R6 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.19■□□□□ 0.02
CDRT4Q8N9R6 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDRT4Q8N9R6 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CDRT4Q8N9R6 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.19■□□□□ 0.02
CDRT4Q8N9R6 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDRT4Q8N9R6 YBX2P1-201ENST00000394192 760 ntBASIC15.19■□□□□ 0.02
CDRT4Q8N9R6 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDRT4Q8N9R6 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.19■□□□□ 0.02
CDRT4Q8N9R6 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.19■□□□□ 0.02
CDRT4Q8N9R6 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDRT4Q8N9R6 TFAMP1-201ENST00000412727 736 ntBASIC15.19■□□□□ 0.02
CDRT4Q8N9R6 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.19■□□□□ 0.02
CDRT4Q8N9R6 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.19■□□□□ 0.02
CDRT4Q8N9R6 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.19■□□□□ 0.02
CDRT4Q8N9R6 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
CDRT4Q8N9R6 AC105233.2-201ENST00000523697 349 ntBASIC15.19■□□□□ 0.02
CDRT4Q8N9R6 AF228730.5-201ENST00000530288 346 ntBASIC15.19■□□□□ 0.02
CDRT4Q8N9R6 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.19■□□□□ 0.02
CDRT4Q8N9R6 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.19■□□□□ 0.02
CDRT4Q8N9R6 AC073389.1-201ENST00000595595 795 ntBASIC15.19■□□□□ 0.02
CDRT4Q8N9R6 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.19■□□□□ 0.02
CDRT4Q8N9R6 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.19■□□□□ 0.02
CDRT4Q8N9R6 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CDRT4Q8N9R6 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDRT4Q8N9R6 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDRT4Q8N9R6 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.19■□□□□ 0.02
CDRT4Q8N9R6 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDRT4Q8N9R6 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDRT4Q8N9R6 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDRT4Q8N9R6 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CDRT4Q8N9R6 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDRT4Q8N9R6 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.19■□□□□ 0.02
CDRT4Q8N9R6 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CDRT4Q8N9R6 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDRT4Q8N9R6 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDRT4Q8N9R6 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDRT4Q8N9R6 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDRT4Q8N9R6 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.18■□□□□ 0.02
CDRT4Q8N9R6 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDRT4Q8N9R6 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDRT4Q8N9R6 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDRT4Q8N9R6 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CDRT4Q8N9R6 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CDRT4Q8N9R6 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDRT4Q8N9R6 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDRT4Q8N9R6 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDRT4Q8N9R6 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDRT4Q8N9R6 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDRT4Q8N9R6 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDRT4Q8N9R6 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDRT4Q8N9R6 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDRT4Q8N9R6 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDRT4Q8N9R6 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.18■□□□□ 0.02
CDRT4Q8N9R6 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.18■□□□□ 0.02
CDRT4Q8N9R6 MKNK2P1-201ENST00000437526 628 ntBASIC15.18■□□□□ 0.02
CDRT4Q8N9R6 AC245100.5-201ENST00000452108 331 ntBASIC15.18■□□□□ 0.02
CDRT4Q8N9R6 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.18■□□□□ 0.02
CDRT4Q8N9R6 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.18■□□□□ 0.02
CDRT4Q8N9R6 AL671883.3-201ENST00000603274 991 ntBASIC15.18■□□□□ 0.02
CDRT4Q8N9R6 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDRT4Q8N9R6 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDRT4Q8N9R6 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CDRT4Q8N9R6 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.18■□□□□ 0.02
CDRT4Q8N9R6 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.18■□□□□ 0.02
CDRT4Q8N9R6 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CDRT4Q8N9R6 AC022188.1-201ENST00000620960 1664 ntBASIC15.18■□□□□ 0.02
CDRT4Q8N9R6 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDRT4Q8N9R6 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.18■□□□□ 0.02
CDRT4Q8N9R6 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CDRT4Q8N9R6 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.18■□□□□ 0.02
CDRT4Q8N9R6 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
CDRT4Q8N9R6 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CDRT4Q8N9R6 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CDRT4Q8N9R6 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDRT4Q8N9R6 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.17■□□□□ 0.02
CDRT4Q8N9R6 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
CDRT4Q8N9R6 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.17■□□□□ 0.02
CDRT4Q8N9R6 AL603832.2-201ENST00000566195 2125 ntBASIC15.17■□□□□ 0.02
CDRT4Q8N9R6 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CDRT4Q8N9R6 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CDRT4Q8N9R6 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.17■□□□□ 0.02
CDRT4Q8N9R6 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDRT4Q8N9R6 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.17■□□□□ 0.02
CDRT4Q8N9R6 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.17■□□□□ 0.02
CDRT4Q8N9R6 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.17■□□□□ 0.02
CDRT4Q8N9R6 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDRT4Q8N9R6 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDRT4Q8N9R6 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDRT4Q8N9R6 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDRT4Q8N9R6 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
CDRT4Q8N9R6 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CDRT4Q8N9R6 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
CDRT4Q8N9R6 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDRT4Q8N9R6 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CDRT4Q8N9R6 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.17■□□□□ 0.02
CDRT4Q8N9R6 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.17■□□□□ 0.02
CDRT4Q8N9R6 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDRT4Q8N9R6 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CDRT4Q8N9R6 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms