Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COMMD1Q8N668 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COMMD1Q8N668 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
COMMD1Q8N668 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
COMMD1Q8N668 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
COMMD1Q8N668 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COMMD1Q8N668 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COMMD1Q8N668 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COMMD1Q8N668 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
COMMD1Q8N668 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COMMD1Q8N668 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
COMMD1Q8N668 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COMMD1Q8N668 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
COMMD1Q8N668 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.67□□□□□ -0.22
COMMD1Q8N668 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.67□□□□□ -0.22
COMMD1Q8N668 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
COMMD1Q8N668 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.67□□□□□ -0.22
COMMD1Q8N668 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.67□□□□□ -0.22
COMMD1Q8N668 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC13.66□□□□□ -0.22
COMMD1Q8N668 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC13.66□□□□□ -0.22
COMMD1Q8N668 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
COMMD1Q8N668 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.66□□□□□ -0.22
COMMD1Q8N668 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD1Q8N668 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.66□□□□□ -0.22
COMMD1Q8N668 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
COMMD1Q8N668 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.66□□□□□ -0.22
COMMD1Q8N668 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.66□□□□□ -0.22
COMMD1Q8N668 NCF1C-201ENST00000438382 1427 ntBASIC13.66□□□□□ -0.22
COMMD1Q8N668 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC13.66□□□□□ -0.22
COMMD1Q8N668 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD1Q8N668 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD1Q8N668 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD1Q8N668 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD1Q8N668 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD1Q8N668 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD1Q8N668 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD1Q8N668 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD1Q8N668 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD1Q8N668 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD1Q8N668 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC13.66□□□□□ -0.22
COMMD1Q8N668 AL022342.1-201ENST00000400363 863 ntBASIC13.66□□□□□ -0.22
COMMD1Q8N668 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC13.66□□□□□ -0.22
COMMD1Q8N668 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD1Q8N668 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.66□□□□□ -0.22
COMMD1Q8N668 RPS2P1-201ENST00000434010 821 ntBASIC13.66□□□□□ -0.22
COMMD1Q8N668 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC13.66□□□□□ -0.22
COMMD1Q8N668 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC13.66□□□□□ -0.22
COMMD1Q8N668 RNA5SP419-201ENST00000515908 135 ntBASIC13.66□□□□□ -0.22
COMMD1Q8N668 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD1Q8N668 AC105339.3-201ENST00000560043 636 ntBASIC13.66□□□□□ -0.22
COMMD1Q8N668 AC120114.3-201ENST00000611923 658 ntBASIC13.66□□□□□ -0.22
COMMD1Q8N668 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD1Q8N668 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC13.66□□□□□ -0.22
COMMD1Q8N668 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC13.66□□□□□ -0.22
COMMD1Q8N668 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD1Q8N668 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
COMMD1Q8N668 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
COMMD1Q8N668 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD1Q8N668 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD1Q8N668 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD1Q8N668 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC13.66□□□□□ -0.22
COMMD1Q8N668 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD1Q8N668 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD1Q8N668 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.66□□□□□ -0.22
COMMD1Q8N668 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD1Q8N668 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD1Q8N668 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD1Q8N668 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD1Q8N668 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
COMMD1Q8N668 AL603832.2-201ENST00000566195 2125 ntBASIC13.66□□□□□ -0.22
COMMD1Q8N668 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD1Q8N668 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
COMMD1Q8N668 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COMMD1Q8N668 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.65□□□□□ -0.22
COMMD1Q8N668 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COMMD1Q8N668 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
COMMD1Q8N668 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
COMMD1Q8N668 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.65□□□□□ -0.22
COMMD1Q8N668 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.65□□□□□ -0.22
COMMD1Q8N668 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.65□□□□□ -0.22
COMMD1Q8N668 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC13.65□□□□□ -0.22
COMMD1Q8N668 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC13.65□□□□□ -0.22
COMMD1Q8N668 AC132938.5-201ENST00000624980 1813 ntBASIC13.65□□□□□ -0.22
COMMD1Q8N668 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
COMMD1Q8N668 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
COMMD1Q8N668 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
COMMD1Q8N668 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC13.65□□□□□ -0.22
COMMD1Q8N668 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC13.65□□□□□ -0.22
COMMD1Q8N668 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC13.65□□□□□ -0.22
COMMD1Q8N668 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC13.65□□□□□ -0.22
COMMD1Q8N668 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
COMMD1Q8N668 BX005266.1-201ENST00000473402 457 ntBASIC13.65□□□□□ -0.22
COMMD1Q8N668 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
COMMD1Q8N668 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC13.65□□□□□ -0.22
COMMD1Q8N668 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC13.65□□□□□ -0.22
COMMD1Q8N668 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC13.65□□□□□ -0.22
COMMD1Q8N668 WDR88-203ENST00000592765 651 ntTSL 5 BASIC13.65□□□□□ -0.22
COMMD1Q8N668 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
COMMD1Q8N668 COPE-211ENST00000600932 1144 ntTSL 5 BASIC13.65□□□□□ -0.22
COMMD1Q8N668 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms