Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
SCML4Q8N228 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCML4Q8N228 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.9■□□□□ 0.3
SCML4Q8N228 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
SCML4Q8N228 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
SCML4Q8N228 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.9■□□□□ 0.3
SCML4Q8N228 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
SCML4Q8N228 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SCML4Q8N228 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.9■□□□□ 0.3
SCML4Q8N228 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.9■□□□□ 0.3
SCML4Q8N228 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.9■□□□□ 0.3
SCML4Q8N228 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.9■□□□□ 0.3
SCML4Q8N228 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SCML4Q8N228 AC097493.3-201ENST00000509725 367 ntBASIC16.9■□□□□ 0.3
SCML4Q8N228 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SCML4Q8N228 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.9■□□□□ 0.3
SCML4Q8N228 AC106028.4-201ENST00000614509 607 ntBASIC16.9■□□□□ 0.3
SCML4Q8N228 SPDYE12P-201ENST00000618416 771 ntBASIC16.9■□□□□ 0.3
SCML4Q8N228 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SCML4Q8N228 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
SCML4Q8N228 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SCML4Q8N228 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCML4Q8N228 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCML4Q8N228 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCML4Q8N228 AL136982.4-201ENST00000437689 1740 ntBASIC16.9■□□□□ 0.3
SCML4Q8N228 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCML4Q8N228 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SCML4Q8N228 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCML4Q8N228 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SCML4Q8N228 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.89■□□□□ 0.3
SCML4Q8N228 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
SCML4Q8N228 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.89■□□□□ 0.3
SCML4Q8N228 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.89■□□□□ 0.3
SCML4Q8N228 AC011270.2-201ENST00000624293 2550 ntBASIC16.89■□□□□ 0.3
SCML4Q8N228 AC046158.3-201ENST00000624947 2558 ntBASIC16.89■□□□□ 0.3
SCML4Q8N228 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.89■□□□□ 0.29
SCML4Q8N228 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCML4Q8N228 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCML4Q8N228 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCML4Q8N228 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCML4Q8N228 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCML4Q8N228 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SCML4Q8N228 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCML4Q8N228 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SCML4Q8N228 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SCML4Q8N228 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.89■□□□□ 0.29
SCML4Q8N228 AL080243.2-201ENST00000418783 582 ntBASIC16.89■□□□□ 0.29
SCML4Q8N228 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.89■□□□□ 0.29
SCML4Q8N228 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.89■□□□□ 0.29
SCML4Q8N228 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.89■□□□□ 0.29
SCML4Q8N228 AL589739.1-201ENST00000607720 493 ntBASIC16.89■□□□□ 0.29
SCML4Q8N228 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCML4Q8N228 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.89■□□□□ 0.29
SCML4Q8N228 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SCML4Q8N228 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.89■□□□□ 0.29
SCML4Q8N228 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCML4Q8N228 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCML4Q8N228 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.89■□□□□ 0.29
SCML4Q8N228 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.89■□□□□ 0.29
SCML4Q8N228 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SCML4Q8N228 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCML4Q8N228 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCML4Q8N228 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCML4Q8N228 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCML4Q8N228 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
SCML4Q8N228 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SCML4Q8N228 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SCML4Q8N228 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SCML4Q8N228 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SCML4Q8N228 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCML4Q8N228 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.88■□□□□ 0.29
SCML4Q8N228 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
SCML4Q8N228 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCML4Q8N228 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SCML4Q8N228 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.88■□□□□ 0.29
SCML4Q8N228 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCML4Q8N228 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCML4Q8N228 AC018695.7-201ENST00000624587 2492 ntBASIC16.88■□□□□ 0.29
SCML4Q8N228 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.88■□□□□ 0.29
SCML4Q8N228 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SCML4Q8N228 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.88■□□□□ 0.29
SCML4Q8N228 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SCML4Q8N228 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCML4Q8N228 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SCML4Q8N228 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SCML4Q8N228 MIR943-201ENST00000401286 94 ntBASIC16.88■□□□□ 0.29
SCML4Q8N228 FO393414.2-201ENST00000405153 598 ntBASIC16.88■□□□□ 0.29
SCML4Q8N228 TREML5P-201ENST00000421694 576 ntBASIC16.88■□□□□ 0.29
SCML4Q8N228 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.88■□□□□ 0.29
SCML4Q8N228 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.88■□□□□ 0.29
SCML4Q8N228 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.88■□□□□ 0.29
SCML4Q8N228 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.88■□□□□ 0.29
SCML4Q8N228 AL390955.2-201ENST00000603032 514 ntBASIC16.88■□□□□ 0.29
SCML4Q8N228 AL138828.2-201ENST00000615812 383 ntBASIC16.88■□□□□ 0.29
SCML4Q8N228 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.88■□□□□ 0.29
SCML4Q8N228 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCML4Q8N228 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SCML4Q8N228 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SCML4Q8N228 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SCML4Q8N228 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms