Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC11.02□□□□□ -0.65
LINC01561Q8N1V8 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01561Q8N1V8 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01561Q8N1V8 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC11.02□□□□□ -0.65
LINC01561Q8N1V8 CD99-202ENST00000381180 530 ntTSL 2 BASIC11.02□□□□□ -0.65
LINC01561Q8N1V8 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC11.02□□□□□ -0.65
LINC01561Q8N1V8 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC11.02□□□□□ -0.65
LINC01561Q8N1V8 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC11.02□□□□□ -0.65
LINC01561Q8N1V8 MTRF1LP2-201ENST00000506027 1122 ntBASIC11.02□□□□□ -0.65
LINC01561Q8N1V8 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC11.02□□□□□ -0.65
LINC01561Q8N1V8 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC11.02□□□□□ -0.65
LINC01561Q8N1V8 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC11.02□□□□□ -0.65
LINC01561Q8N1V8 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC11.02□□□□□ -0.65
LINC01561Q8N1V8 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01561Q8N1V8 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC11.02□□□□□ -0.65
LINC01561Q8N1V8 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC11.02□□□□□ -0.65
LINC01561Q8N1V8 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC11.02□□□□□ -0.65
LINC01561Q8N1V8 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01561Q8N1V8 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01561Q8N1V8 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01561Q8N1V8 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
LINC01561Q8N1V8 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
LINC01561Q8N1V8 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC11.02□□□□□ -0.65
LINC01561Q8N1V8 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01561Q8N1V8 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01561Q8N1V8 AC008677.1-201ENST00000519230 1561 ntBASIC11.02□□□□□ -0.65
LINC01561Q8N1V8 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01561Q8N1V8 POLL-206ENST00000370172 2308 ntTSL 2 BASIC11.02□□□□□ -0.65
LINC01561Q8N1V8 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01561Q8N1V8 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01561Q8N1V8 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01561Q8N1V8 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01561Q8N1V8 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
LINC01561Q8N1V8 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01561Q8N1V8 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01561Q8N1V8 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01561Q8N1V8 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
LINC01561Q8N1V8 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01561Q8N1V8 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC11.02□□□□□ -0.65
LINC01561Q8N1V8 AC079328.2-201ENST00000561241 3354 ntBASIC11.02□□□□□ -0.65
LINC01561Q8N1V8 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01561Q8N1V8 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC11.02□□□□□ -0.65
LINC01561Q8N1V8 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01561Q8N1V8 AC067930.6-201ENST00000623257 4947 ntBASIC11.02□□□□□ -0.65
LINC01561Q8N1V8 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
LINC01561Q8N1V8 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 DKFZP434H168-201ENST00000567381 1905 ntBASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 TMBIM7P-203ENST00000641617 1718 ntBASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 AC012569.1-201ENST00000591191 1524 ntBASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 HAUS4P1-201ENST00000406739 1145 ntBASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 MDH2-205ENST00000461263 648 ntTSL 2 BASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 MMP17-203ENST00000535004 719 ntTSL 3 BASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 AL365330.1-201ENST00000607459 531 ntBASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 AC091076.1-201ENST00000610741 619 ntBASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 CICP13-201ENST00000422015 2789 ntBASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC11.01□□□□□ -0.65
LINC01561Q8N1V8 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC11.01□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms