Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHPFQ8IZ52 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHPFQ8IZ52 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHPFQ8IZ52 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.62■□□□□ 0.25
CHPFQ8IZ52 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHPFQ8IZ52 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHPFQ8IZ52 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHPFQ8IZ52 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.62■□□□□ 0.25
CHPFQ8IZ52 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.62■□□□□ 0.25
CHPFQ8IZ52 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.62■□□□□ 0.25
CHPFQ8IZ52 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.62■□□□□ 0.25
CHPFQ8IZ52 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.62■□□□□ 0.25
CHPFQ8IZ52 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.62■□□□□ 0.25
CHPFQ8IZ52 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
CHPFQ8IZ52 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.62■□□□□ 0.25
CHPFQ8IZ52 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHPFQ8IZ52 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CHPFQ8IZ52 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHPFQ8IZ52 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHPFQ8IZ52 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHPFQ8IZ52 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.62■□□□□ 0.25
CHPFQ8IZ52 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CHPFQ8IZ52 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHPFQ8IZ52 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.62■□□□□ 0.25
CHPFQ8IZ52 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CHPFQ8IZ52 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHPFQ8IZ52 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHPFQ8IZ52 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.62■□□□□ 0.25
CHPFQ8IZ52 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHPFQ8IZ52 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHPFQ8IZ52 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHPFQ8IZ52 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHPFQ8IZ52 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CHPFQ8IZ52 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHPFQ8IZ52 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.61■□□□□ 0.25
CHPFQ8IZ52 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.61■□□□□ 0.25
CHPFQ8IZ52 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHPFQ8IZ52 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHPFQ8IZ52 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHPFQ8IZ52 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CHPFQ8IZ52 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.61■□□□□ 0.25
CHPFQ8IZ52 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.61■□□□□ 0.25
CHPFQ8IZ52 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHPFQ8IZ52 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHPFQ8IZ52 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHPFQ8IZ52 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHPFQ8IZ52 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.61■□□□□ 0.25
CHPFQ8IZ52 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHPFQ8IZ52 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHPFQ8IZ52 AC009477.1-201ENST00000452936 217 ntBASIC16.61■□□□□ 0.25
CHPFQ8IZ52 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.61■□□□□ 0.25
CHPFQ8IZ52 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHPFQ8IZ52 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.61■□□□□ 0.25
CHPFQ8IZ52 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.61■□□□□ 0.25
CHPFQ8IZ52 AP005018.1-201ENST00000525475 301 ntBASIC16.61■□□□□ 0.25
CHPFQ8IZ52 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHPFQ8IZ52 BANF1P1-201ENST00000553684 263 ntBASIC16.61■□□□□ 0.25
CHPFQ8IZ52 AC024267.1-201ENST00000582320 895 ntBASIC16.61■□□□□ 0.25
CHPFQ8IZ52 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHPFQ8IZ52 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.61■□□□□ 0.25
CHPFQ8IZ52 AL662799.1-202ENST00000614205 422 ntBASIC16.61■□□□□ 0.25
CHPFQ8IZ52 AL358472.5-202ENST00000641448 1267 ntBASIC16.61■□□□□ 0.25
CHPFQ8IZ52 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.61■□□□□ 0.25
CHPFQ8IZ52 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHPFQ8IZ52 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHPFQ8IZ52 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHPFQ8IZ52 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHPFQ8IZ52 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CHPFQ8IZ52 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.61■□□□□ 0.25
CHPFQ8IZ52 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHPFQ8IZ52 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHPFQ8IZ52 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHPFQ8IZ52 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.61■□□□□ 0.25
CHPFQ8IZ52 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHPFQ8IZ52 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CHPFQ8IZ52 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHPFQ8IZ52 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.61■□□□□ 0.25
CHPFQ8IZ52 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHPFQ8IZ52 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHPFQ8IZ52 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CHPFQ8IZ52 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHPFQ8IZ52 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CHPFQ8IZ52 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHPFQ8IZ52 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.6■□□□□ 0.25
CHPFQ8IZ52 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHPFQ8IZ52 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHPFQ8IZ52 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHPFQ8IZ52 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CHPFQ8IZ52 GPAA1P2-202ENST00000606848 1787 ntBASIC16.6■□□□□ 0.25
CHPFQ8IZ52 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CHPFQ8IZ52 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHPFQ8IZ52 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHPFQ8IZ52 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.6■□□□□ 0.25
CHPFQ8IZ52 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.6■□□□□ 0.25
CHPFQ8IZ52 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHPFQ8IZ52 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.6■□□□□ 0.25
CHPFQ8IZ52 AC093724.1-201ENST00000448659 1027 ntBASIC16.6■□□□□ 0.25
CHPFQ8IZ52 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHPFQ8IZ52 AL079307.3-201ENST00000556114 283 ntBASIC16.6■□□□□ 0.25
CHPFQ8IZ52 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms