Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHD1LQ86WJ1 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHD1LQ86WJ1 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CHD1LQ86WJ1 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC20.17■□□□□ 0.82
CHD1LQ86WJ1 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC20.17■□□□□ 0.82
CHD1LQ86WJ1 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC20.17■□□□□ 0.82
CHD1LQ86WJ1 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC20.17■□□□□ 0.82
CHD1LQ86WJ1 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.17■□□□□ 0.82
CHD1LQ86WJ1 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC20.17■□□□□ 0.82
CHD1LQ86WJ1 AC120114.3-201ENST00000611923 658 ntBASIC20.17■□□□□ 0.82
CHD1LQ86WJ1 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.17■□□□□ 0.82
CHD1LQ86WJ1 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.17■□□□□ 0.82
CHD1LQ86WJ1 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC20.17■□□□□ 0.82
CHD1LQ86WJ1 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHD1LQ86WJ1 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CHD1LQ86WJ1 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHD1LQ86WJ1 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
CHD1LQ86WJ1 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHD1LQ86WJ1 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC20.17■□□□□ 0.82
CHD1LQ86WJ1 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC20.17■□□□□ 0.82
CHD1LQ86WJ1 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CHD1LQ86WJ1 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHD1LQ86WJ1 NARF-206ENST00000457415 1668 ntTSL 5 BASIC20.16■□□□□ 0.82
CHD1LQ86WJ1 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHD1LQ86WJ1 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHD1LQ86WJ1 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHD1LQ86WJ1 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHD1LQ86WJ1 PRAL-201ENST00000624952 3286 ntBASIC20.16■□□□□ 0.82
CHD1LQ86WJ1 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC20.16■□□□□ 0.82
CHD1LQ86WJ1 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHD1LQ86WJ1 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC20.16■□□□□ 0.82
CHD1LQ86WJ1 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHD1LQ86WJ1 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHD1LQ86WJ1 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC20.16■□□□□ 0.82
CHD1LQ86WJ1 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CHD1LQ86WJ1 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC20.16■□□□□ 0.82
CHD1LQ86WJ1 KRT18P3-201ENST00000451602 1288 ntBASIC20.16■□□□□ 0.82
CHD1LQ86WJ1 PRYP6-201ENST00000514804 343 ntBASIC20.16■□□□□ 0.82
CHD1LQ86WJ1 RNA5SP416-201ENST00000516838 111 ntBASIC20.16■□□□□ 0.82
CHD1LQ86WJ1 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC20.16■□□□□ 0.82
CHD1LQ86WJ1 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC20.16■□□□□ 0.82
CHD1LQ86WJ1 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHD1LQ86WJ1 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHD1LQ86WJ1 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHD1LQ86WJ1 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CHD1LQ86WJ1 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHD1LQ86WJ1 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHD1LQ86WJ1 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC20.16■□□□□ 0.82
CHD1LQ86WJ1 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
CHD1LQ86WJ1 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC20.15■□□□□ 0.82
CHD1LQ86WJ1 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHD1LQ86WJ1 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CHD1LQ86WJ1 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHD1LQ86WJ1 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
CHD1LQ86WJ1 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CHD1LQ86WJ1 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHD1LQ86WJ1 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHD1LQ86WJ1 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CHD1LQ86WJ1 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CHD1LQ86WJ1 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CHD1LQ86WJ1 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHD1LQ86WJ1 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHD1LQ86WJ1 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CHD1LQ86WJ1 AC002056.1-201ENST00000395613 760 ntBASIC20.15■□□□□ 0.82
CHD1LQ86WJ1 HAUS4P1-201ENST00000406739 1145 ntBASIC20.15■□□□□ 0.82
CHD1LQ86WJ1 MED15P5-201ENST00000423150 992 ntBASIC20.15■□□□□ 0.82
CHD1LQ86WJ1 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.15■□□□□ 0.82
CHD1LQ86WJ1 AL591424.1-201ENST00000442569 1213 ntBASIC20.15■□□□□ 0.82
CHD1LQ86WJ1 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CHD1LQ86WJ1 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.15■□□□□ 0.82
CHD1LQ86WJ1 AL365330.1-201ENST00000607459 531 ntBASIC20.15■□□□□ 0.82
CHD1LQ86WJ1 AC027601.4-201ENST00000611259 610 ntBASIC20.15■□□□□ 0.82
CHD1LQ86WJ1 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
CHD1LQ86WJ1 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHD1LQ86WJ1 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CHD1LQ86WJ1 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CHD1LQ86WJ1 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CHD1LQ86WJ1 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC20.15■□□□□ 0.82
CHD1LQ86WJ1 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHD1LQ86WJ1 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CHD1LQ86WJ1 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CHD1LQ86WJ1 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC20.15■□□□□ 0.82
CHD1LQ86WJ1 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC20.15■□□□□ 0.82
CHD1LQ86WJ1 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CHD1LQ86WJ1 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
CHD1LQ86WJ1 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHD1LQ86WJ1 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CHD1LQ86WJ1 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CHD1LQ86WJ1 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHD1LQ86WJ1 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CHD1LQ86WJ1 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHD1LQ86WJ1 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CHD1LQ86WJ1 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CHD1LQ86WJ1 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CHD1LQ86WJ1 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CHD1LQ86WJ1 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC20.14■□□□□ 0.81
CHD1LQ86WJ1 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC20.14■□□□□ 0.81
CHD1LQ86WJ1 AL138918.1-201ENST00000568306 659 ntBASIC20.14■□□□□ 0.81
CHD1LQ86WJ1 FAM197Y3-203ENST00000618346 717 ntBASIC20.14■□□□□ 0.81
CHD1LQ86WJ1 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms