Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC20.2■□□□□ 0.82
RGPD4Q7Z3J3 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RGPD4Q7Z3J3 AC092053.1-201ENST00000605787 1936 ntBASIC20.2■□□□□ 0.82
RGPD4Q7Z3J3 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
RGPD4Q7Z3J3 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RGPD4Q7Z3J3 TP73-209ENST00000603362 1668 ntTSL 5 BASIC20.19■□□□□ 0.82
RGPD4Q7Z3J3 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC20.19■□□□□ 0.82
RGPD4Q7Z3J3 AL354877.1-201ENST00000424412 413 ntBASIC20.19■□□□□ 0.82
RGPD4Q7Z3J3 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
RGPD4Q7Z3J3 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
RGPD4Q7Z3J3 AC005730.2-201ENST00000564549 1184 ntBASIC20.19■□□□□ 0.82
RGPD4Q7Z3J3 AC132938.4-201ENST00000623835 848 ntBASIC20.19■□□□□ 0.82
RGPD4Q7Z3J3 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
RGPD4Q7Z3J3 KRT8P35-201ENST00000483942 1338 ntBASIC20.19■□□□□ 0.82
RGPD4Q7Z3J3 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RGPD4Q7Z3J3 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RGPD4Q7Z3J3 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RGPD4Q7Z3J3 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RGPD4Q7Z3J3 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RGPD4Q7Z3J3 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RGPD4Q7Z3J3 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
RGPD4Q7Z3J3 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RGPD4Q7Z3J3 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RGPD4Q7Z3J3 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RGPD4Q7Z3J3 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC20.18■□□□□ 0.82
RGPD4Q7Z3J3 COX5BP1-201ENST00000507622 393 ntBASIC20.18■□□□□ 0.82
RGPD4Q7Z3J3 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RGPD4Q7Z3J3 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC20.18■□□□□ 0.82
RGPD4Q7Z3J3 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC20.18■□□□□ 0.82
RGPD4Q7Z3J3 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RGPD4Q7Z3J3 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
RGPD4Q7Z3J3 AF254983.2-201ENST00000612331 135 ntBASIC20.18■□□□□ 0.82
RGPD4Q7Z3J3 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.18■□□□□ 0.82
RGPD4Q7Z3J3 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RGPD4Q7Z3J3 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC20.18■□□□□ 0.82
RGPD4Q7Z3J3 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.18■□□□□ 0.82
RGPD4Q7Z3J3 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.18■□□□□ 0.82
RGPD4Q7Z3J3 AL391256.1-201ENST00000443260 1855 ntBASIC20.18■□□□□ 0.82
RGPD4Q7Z3J3 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.18■□□□□ 0.82
RGPD4Q7Z3J3 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RGPD4Q7Z3J3 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RGPD4Q7Z3J3 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RGPD4Q7Z3J3 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC20.18■□□□□ 0.82
RGPD4Q7Z3J3 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC20.18■□□□□ 0.82
RGPD4Q7Z3J3 AC009113.1-201ENST00000570267 2443 ntBASIC20.18■□□□□ 0.82
RGPD4Q7Z3J3 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
RGPD4Q7Z3J3 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC20.18■□□□□ 0.82
RGPD4Q7Z3J3 AL133267.1-201ENST00000398220 340 ntBASIC20.18■□□□□ 0.82
RGPD4Q7Z3J3 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC20.18■□□□□ 0.82
RGPD4Q7Z3J3 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RGPD4Q7Z3J3 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC20.18■□□□□ 0.82
RGPD4Q7Z3J3 CMC2-214ENST00000565925 640 ntTSL 5 BASIC20.18■□□□□ 0.82
RGPD4Q7Z3J3 AP005019.2-201ENST00000615104 511 ntBASIC20.18■□□□□ 0.82
RGPD4Q7Z3J3 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RGPD4Q7Z3J3 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RGPD4Q7Z3J3 GGT3P-204ENST00000453783 1664 ntBASIC20.18■□□□□ 0.82
RGPD4Q7Z3J3 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.18■□□□□ 0.82
RGPD4Q7Z3J3 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RGPD4Q7Z3J3 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC20.18■□□□□ 0.82
RGPD4Q7Z3J3 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RGPD4Q7Z3J3 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
RGPD4Q7Z3J3 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC20.17■□□□□ 0.82
RGPD4Q7Z3J3 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC20.17■□□□□ 0.82
RGPD4Q7Z3J3 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RGPD4Q7Z3J3 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RGPD4Q7Z3J3 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
RGPD4Q7Z3J3 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
RGPD4Q7Z3J3 AC024681.1-201ENST00000521917 487 ntBASIC20.17■□□□□ 0.82
RGPD4Q7Z3J3 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC20.17■□□□□ 0.82
RGPD4Q7Z3J3 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC20.17■□□□□ 0.82
RGPD4Q7Z3J3 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC20.17■□□□□ 0.82
RGPD4Q7Z3J3 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC20.17■□□□□ 0.82
RGPD4Q7Z3J3 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RGPD4Q7Z3J3 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RGPD4Q7Z3J3 AC006480.2-201ENST00000609770 1337 ntBASIC20.17■□□□□ 0.82
RGPD4Q7Z3J3 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RGPD4Q7Z3J3 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
RGPD4Q7Z3J3 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RGPD4Q7Z3J3 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC20.17■□□□□ 0.82
RGPD4Q7Z3J3 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RGPD4Q7Z3J3 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
RGPD4Q7Z3J3 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RGPD4Q7Z3J3 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RGPD4Q7Z3J3 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RGPD4Q7Z3J3 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC20.16■□□□□ 0.82
RGPD4Q7Z3J3 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RGPD4Q7Z3J3 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RGPD4Q7Z3J3 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC20.16■□□□□ 0.82
RGPD4Q7Z3J3 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC20.16■□□□□ 0.82
RGPD4Q7Z3J3 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC20.16■□□□□ 0.82
RGPD4Q7Z3J3 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RGPD4Q7Z3J3 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC20.16■□□□□ 0.82
RGPD4Q7Z3J3 HLA-C-210ENST00000640219 976 ntBASIC20.16■□□□□ 0.82
RGPD4Q7Z3J3 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RGPD4Q7Z3J3 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC20.16■□□□□ 0.82
RGPD4Q7Z3J3 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
RGPD4Q7Z3J3 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RGPD4Q7Z3J3 AMT-206ENST00000458307 1860 ntTSL 2 BASIC20.16■□□□□ 0.82
RGPD4Q7Z3J3 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC20.16■□□□□ 0.82
RGPD4Q7Z3J3 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms