Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF44Q7L0R7 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF44Q7L0R7 FAM220BP-201ENST00000377689 816 ntBASIC15.68■□□□□ 0.1
RNF44Q7L0R7 PMS2P2-201ENST00000425039 1128 ntBASIC15.68■□□□□ 0.1
RNF44Q7L0R7 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RNF44Q7L0R7 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RNF44Q7L0R7 ALG1L8P-201ENST00000533887 760 ntBASIC15.68■□□□□ 0.1
RNF44Q7L0R7 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.68■□□□□ 0.1
RNF44Q7L0R7 AL512356.2-201ENST00000546955 174 ntBASIC15.68■□□□□ 0.1
RNF44Q7L0R7 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.68■□□□□ 0.1
RNF44Q7L0R7 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.68■□□□□ 0.1
RNF44Q7L0R7 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF44Q7L0R7 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
RNF44Q7L0R7 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
RNF44Q7L0R7 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
RNF44Q7L0R7 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF44Q7L0R7 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RNF44Q7L0R7 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF44Q7L0R7 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.68■□□□□ 0.1
RNF44Q7L0R7 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.68■□□□□ 0.1
RNF44Q7L0R7 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.68■□□□□ 0.1
RNF44Q7L0R7 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.68■□□□□ 0.1
RNF44Q7L0R7 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.68■□□□□ 0.1
RNF44Q7L0R7 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RNF44Q7L0R7 AC007326.2-201ENST00000624224 7579 ntBASIC15.68■□□□□ 0.1
RNF44Q7L0R7 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF44Q7L0R7 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF44Q7L0R7 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF44Q7L0R7 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
RNF44Q7L0R7 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.67■□□□□ 0.1
RNF44Q7L0R7 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.67■□□□□ 0.1
RNF44Q7L0R7 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.67■□□□□ 0.1
RNF44Q7L0R7 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF44Q7L0R7 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.67■□□□□ 0.1
RNF44Q7L0R7 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF44Q7L0R7 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF44Q7L0R7 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RNF44Q7L0R7 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RNF44Q7L0R7 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RNF44Q7L0R7 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RNF44Q7L0R7 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.67■□□□□ 0.1
RNF44Q7L0R7 HLA-H-201ENST00000383620 1096 ntBASIC15.67■□□□□ 0.1
RNF44Q7L0R7 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
RNF44Q7L0R7 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
RNF44Q7L0R7 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.67■□□□□ 0.1
RNF44Q7L0R7 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.67■□□□□ 0.1
RNF44Q7L0R7 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.67■□□□□ 0.1
RNF44Q7L0R7 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF44Q7L0R7 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RNF44Q7L0R7 AC026150.2-201ENST00000564693 1156 ntBASIC15.67■□□□□ 0.1
RNF44Q7L0R7 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF44Q7L0R7 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.67■□□□□ 0.1
RNF44Q7L0R7 AC093028.1-201ENST00000622998 982 ntBASIC15.67■□□□□ 0.1
RNF44Q7L0R7 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF44Q7L0R7 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF44Q7L0R7 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF44Q7L0R7 ME2P1-201ENST00000426028 1970 ntBASIC15.67■□□□□ 0.1
RNF44Q7L0R7 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.67■□□□□ 0.1
RNF44Q7L0R7 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
RNF44Q7L0R7 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RNF44Q7L0R7 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RNF44Q7L0R7 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RNF44Q7L0R7 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.66■□□□□ 0.1
RNF44Q7L0R7 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.66■□□□□ 0.1
RNF44Q7L0R7 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF44Q7L0R7 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.66■□□□□ 0.1
RNF44Q7L0R7 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RNF44Q7L0R7 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RNF44Q7L0R7 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.66■□□□□ 0.1
RNF44Q7L0R7 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF44Q7L0R7 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF44Q7L0R7 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.66■□□□□ 0.1
RNF44Q7L0R7 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RNF44Q7L0R7 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RNF44Q7L0R7 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RNF44Q7L0R7 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RNF44Q7L0R7 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.66■□□□□ 0.1
RNF44Q7L0R7 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.66■□□□□ 0.1
RNF44Q7L0R7 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF44Q7L0R7 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RNF44Q7L0R7 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RNF44Q7L0R7 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
RNF44Q7L0R7 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF44Q7L0R7 RARRES2P9-201ENST00000565168 469 ntBASIC15.66■□□□□ 0.1
RNF44Q7L0R7 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF44Q7L0R7 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RNF44Q7L0R7 AL589702.1-201ENST00000641229 1509 ntBASIC15.66■□□□□ 0.1
RNF44Q7L0R7 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RNF44Q7L0R7 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF44Q7L0R7 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RNF44Q7L0R7 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
RNF44Q7L0R7 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF44Q7L0R7 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
RNF44Q7L0R7 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.66■□□□□ 0.1
RNF44Q7L0R7 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RNF44Q7L0R7 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF44Q7L0R7 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF44Q7L0R7 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RNF44Q7L0R7 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RNF44Q7L0R7 AC005622.1-201ENST00000636801 1703 ntBASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms