Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VPS13CQ709C8 AC078925.2-201ENST00000624013 1973 ntBASIC13.38□□□□□ -0.27
VPS13CQ709C8 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
VPS13CQ709C8 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.38□□□□□ -0.27
VPS13CQ709C8 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC13.38□□□□□ -0.27
VPS13CQ709C8 AC018735.1-201ENST00000437208 1502 ntBASIC13.38□□□□□ -0.27
VPS13CQ709C8 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
VPS13CQ709C8 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
VPS13CQ709C8 KRT8P37-201ENST00000451609 1420 ntBASIC13.38□□□□□ -0.27
VPS13CQ709C8 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VPS13CQ709C8 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.37□□□□□ -0.27
VPS13CQ709C8 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
VPS13CQ709C8 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.37□□□□□ -0.27
VPS13CQ709C8 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
VPS13CQ709C8 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.37□□□□□ -0.27
VPS13CQ709C8 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
VPS13CQ709C8 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VPS13CQ709C8 AL139384.1-201ENST00000612143 3047 ntBASIC13.37□□□□□ -0.27
VPS13CQ709C8 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VPS13CQ709C8 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
VPS13CQ709C8 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
VPS13CQ709C8 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.37□□□□□ -0.27
VPS13CQ709C8 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
VPS13CQ709C8 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VPS13CQ709C8 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VPS13CQ709C8 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VPS13CQ709C8 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VPS13CQ709C8 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
VPS13CQ709C8 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VPS13CQ709C8 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC13.37□□□□□ -0.27
VPS13CQ709C8 AC253536.4-201ENST00000440539 267 ntBASIC13.37□□□□□ -0.27
VPS13CQ709C8 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.37□□□□□ -0.27
VPS13CQ709C8 AC124283.3-201ENST00000570869 594 ntBASIC13.37□□□□□ -0.27
VPS13CQ709C8 AC024267.1-201ENST00000582320 895 ntBASIC13.37□□□□□ -0.27
VPS13CQ709C8 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VPS13CQ709C8 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.37□□□□□ -0.27
VPS13CQ709C8 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC13.37□□□□□ -0.27
VPS13CQ709C8 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC13.37□□□□□ -0.27
VPS13CQ709C8 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
VPS13CQ709C8 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
VPS13CQ709C8 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
VPS13CQ709C8 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
VPS13CQ709C8 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC13.37□□□□□ -0.27
VPS13CQ709C8 AL118558.3-201ENST00000607414 1079 ntBASIC13.37□□□□□ -0.27
VPS13CQ709C8 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VPS13CQ709C8 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VPS13CQ709C8 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
VPS13CQ709C8 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
VPS13CQ709C8 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.37□□□□□ -0.27
VPS13CQ709C8 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VPS13CQ709C8 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC13.37□□□□□ -0.27
VPS13CQ709C8 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC13.37□□□□□ -0.27
VPS13CQ709C8 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.37□□□□□ -0.27
VPS13CQ709C8 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VPS13CQ709C8 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VPS13CQ709C8 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VPS13CQ709C8 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VPS13CQ709C8 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VPS13CQ709C8 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VPS13CQ709C8 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
VPS13CQ709C8 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VPS13CQ709C8 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
VPS13CQ709C8 TDH-203ENST00000531764 1110 ntBASIC13.36□□□□□ -0.27
VPS13CQ709C8 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.36□□□□□ -0.27
VPS13CQ709C8 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.36□□□□□ -0.27
VPS13CQ709C8 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VPS13CQ709C8 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VPS13CQ709C8 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC13.36□□□□□ -0.27
VPS13CQ709C8 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
VPS13CQ709C8 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC13.36□□□□□ -0.27
VPS13CQ709C8 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
VPS13CQ709C8 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VPS13CQ709C8 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VPS13CQ709C8 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VPS13CQ709C8 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
VPS13CQ709C8 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
VPS13CQ709C8 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VPS13CQ709C8 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC13.36□□□□□ -0.27
VPS13CQ709C8 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VPS13CQ709C8 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.36□□□□□ -0.27
VPS13CQ709C8 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VPS13CQ709C8 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.36□□□□□ -0.27
VPS13CQ709C8 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC13.36□□□□□ -0.27
VPS13CQ709C8 AL008638.5-201ENST00000623814 1298 ntBASIC13.36□□□□□ -0.27
VPS13CQ709C8 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VPS13CQ709C8 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
VPS13CQ709C8 AC022211.2-201ENST00000585075 2527 ntBASIC13.36□□□□□ -0.27
VPS13CQ709C8 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.36□□□□□ -0.27
VPS13CQ709C8 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC13.36□□□□□ -0.27
VPS13CQ709C8 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
VPS13CQ709C8 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VPS13CQ709C8 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
VPS13CQ709C8 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC13.36□□□□□ -0.27
VPS13CQ709C8 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.36□□□□□ -0.27
VPS13CQ709C8 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VPS13CQ709C8 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC13.36□□□□□ -0.27
VPS13CQ709C8 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC13.36□□□□□ -0.27
VPS13CQ709C8 TSACC-208ENST00000481479 741 ntTSL 2 BASIC13.36□□□□□ -0.27
VPS13CQ709C8 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC13.36□□□□□ -0.27
VPS13CQ709C8 KRT90P-201ENST00000549264 1064 ntBASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms