Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNF43Q68DV7 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF43Q68DV7 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.18■□□□□ 0.34
RNF43Q68DV7 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.18■□□□□ 0.34
RNF43Q68DV7 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF43Q68DV7 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF43Q68DV7 SNX33P1-201ENST00000592116 1762 ntBASIC17.17■□□□□ 0.34
RNF43Q68DV7 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF43Q68DV7 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF43Q68DV7 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF43Q68DV7 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF43Q68DV7 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF43Q68DV7 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF43Q68DV7 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF43Q68DV7 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF43Q68DV7 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF43Q68DV7 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF43Q68DV7 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF43Q68DV7 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF43Q68DV7 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF43Q68DV7 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF43Q68DV7 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.17■□□□□ 0.34
RNF43Q68DV7 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF43Q68DV7 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF43Q68DV7 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF43Q68DV7 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF43Q68DV7 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF43Q68DV7 INGX-202ENST00000489074 768 ntBASIC17.17■□□□□ 0.34
RNF43Q68DV7 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
RNF43Q68DV7 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.17■□□□□ 0.34
RNF43Q68DV7 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.17■□□□□ 0.34
RNF43Q68DV7 AL135744.1-201ENST00000565098 629 ntBASIC17.17■□□□□ 0.34
RNF43Q68DV7 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF43Q68DV7 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.17■□□□□ 0.34
RNF43Q68DV7 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.17■□□□□ 0.34
RNF43Q68DV7 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF43Q68DV7 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF43Q68DV7 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF43Q68DV7 AC104640.1-201ENST00000562617 2109 ntBASIC17.17■□□□□ 0.34
RNF43Q68DV7 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF43Q68DV7 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
RNF43Q68DV7 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF43Q68DV7 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RNF43Q68DV7 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
RNF43Q68DV7 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF43Q68DV7 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.16■□□□□ 0.34
RNF43Q68DV7 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.16■□□□□ 0.34
RNF43Q68DV7 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF43Q68DV7 AC079328.2-201ENST00000561241 3354 ntBASIC17.16■□□□□ 0.34
RNF43Q68DV7 WASH6P-202ENST00000359512 1437 ntBASIC17.16■□□□□ 0.34
RNF43Q68DV7 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.16■□□□□ 0.34
RNF43Q68DV7 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF43Q68DV7 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF43Q68DV7 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF43Q68DV7 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.16■□□□□ 0.34
RNF43Q68DV7 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.16■□□□□ 0.34
RNF43Q68DV7 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.16■□□□□ 0.34
RNF43Q68DV7 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF43Q68DV7 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.16■□□□□ 0.34
RNF43Q68DV7 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF43Q68DV7 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF43Q68DV7 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.16■□□□□ 0.34
RNF43Q68DV7 AC067863.1-201ENST00000494933 530 ntBASIC17.16■□□□□ 0.34
RNF43Q68DV7 AC079140.1-201ENST00000508039 487 ntBASIC17.16■□□□□ 0.34
RNF43Q68DV7 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.16■□□□□ 0.34
RNF43Q68DV7 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.16■□□□□ 0.34
RNF43Q68DV7 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RNF43Q68DV7 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RNF43Q68DV7 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF43Q68DV7 PAUPAR-201ENST00000630360 2965 ntBASIC17.16■□□□□ 0.34
RNF43Q68DV7 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF43Q68DV7 AL139011.1-202ENST00000642063 584 ntBASIC17.16■□□□□ 0.34
RNF43Q68DV7 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF43Q68DV7 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.16■□□□□ 0.34
RNF43Q68DV7 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF43Q68DV7 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF43Q68DV7 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF43Q68DV7 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF43Q68DV7 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF43Q68DV7 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.16■□□□□ 0.34
RNF43Q68DV7 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.16■□□□□ 0.34
RNF43Q68DV7 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF43Q68DV7 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF43Q68DV7 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.16■□□□□ 0.34
RNF43Q68DV7 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.15■□□□□ 0.34
RNF43Q68DV7 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.15■□□□□ 0.34
RNF43Q68DV7 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.15■□□□□ 0.34
RNF43Q68DV7 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
RNF43Q68DV7 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.15■□□□□ 0.34
RNF43Q68DV7 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.15■□□□□ 0.34
RNF43Q68DV7 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF43Q68DV7 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.15■□□□□ 0.34
RNF43Q68DV7 AL627223.1-201ENST00000416693 442 ntBASIC17.15■□□□□ 0.34
RNF43Q68DV7 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF43Q68DV7 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF43Q68DV7 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
RNF43Q68DV7 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.15■□□□□ 0.34
RNF43Q68DV7 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.15■□□□□ 0.34
RNF43Q68DV7 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF43Q68DV7 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms