Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
USH1GQ495M9 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
USH1GQ495M9 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USH1GQ495M9 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USH1GQ495M9 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USH1GQ495M9 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC18.71■□□□□ 0.59
USH1GQ495M9 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.58
USH1GQ495M9 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.71■□□□□ 0.58
USH1GQ495M9 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
USH1GQ495M9 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USH1GQ495M9 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USH1GQ495M9 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USH1GQ495M9 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USH1GQ495M9 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.7■□□□□ 0.58
USH1GQ495M9 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USH1GQ495M9 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USH1GQ495M9 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USH1GQ495M9 RPS19-201ENST00000221975 500 ntTSL 3 BASIC18.7■□□□□ 0.58
USH1GQ495M9 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USH1GQ495M9 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
USH1GQ495M9 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
USH1GQ495M9 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.7■□□□□ 0.58
USH1GQ495M9 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USH1GQ495M9 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USH1GQ495M9 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
USH1GQ495M9 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USH1GQ495M9 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.7■□□□□ 0.58
USH1GQ495M9 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.7■□□□□ 0.58
USH1GQ495M9 AL035633.1-201ENST00000406139 838 ntBASIC18.7■□□□□ 0.58
USH1GQ495M9 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USH1GQ495M9 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.7■□□□□ 0.58
USH1GQ495M9 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
USH1GQ495M9 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
USH1GQ495M9 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC18.7■□□□□ 0.58
USH1GQ495M9 LY6E-204ENST00000519546 971 ntTSL 2 BASIC18.7■□□□□ 0.58
USH1GQ495M9 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18.7■□□□□ 0.58
USH1GQ495M9 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.7■□□□□ 0.58
USH1GQ495M9 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
USH1GQ495M9 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.7■□□□□ 0.58
USH1GQ495M9 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
USH1GQ495M9 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
USH1GQ495M9 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USH1GQ495M9 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
USH1GQ495M9 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USH1GQ495M9 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.7■□□□□ 0.58
USH1GQ495M9 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.7■□□□□ 0.58
USH1GQ495M9 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
USH1GQ495M9 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USH1GQ495M9 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.7■□□□□ 0.58
USH1GQ495M9 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.7■□□□□ 0.58
USH1GQ495M9 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC18.7■□□□□ 0.58
USH1GQ495M9 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
USH1GQ495M9 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
USH1GQ495M9 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USH1GQ495M9 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.69■□□□□ 0.58
USH1GQ495M9 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USH1GQ495M9 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
USH1GQ495M9 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USH1GQ495M9 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.69■□□□□ 0.58
USH1GQ495M9 AL080243.2-201ENST00000418783 582 ntBASIC18.69■□□□□ 0.58
USH1GQ495M9 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.69■□□□□ 0.58
USH1GQ495M9 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.69■□□□□ 0.58
USH1GQ495M9 OARD1-208ENST00000469104 704 ntTSL 2 BASIC18.69■□□□□ 0.58
USH1GQ495M9 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.69■□□□□ 0.58
USH1GQ495M9 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC18.69■□□□□ 0.58
USH1GQ495M9 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC18.69■□□□□ 0.58
USH1GQ495M9 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
USH1GQ495M9 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
USH1GQ495M9 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
USH1GQ495M9 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.69■□□□□ 0.58
USH1GQ495M9 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
USH1GQ495M9 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
USH1GQ495M9 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USH1GQ495M9 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USH1GQ495M9 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
USH1GQ495M9 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
USH1GQ495M9 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.69■□□□□ 0.58
USH1GQ495M9 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
USH1GQ495M9 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
USH1GQ495M9 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
USH1GQ495M9 AC022144.1-201ENST00000602255 1580 ntBASIC18.68■□□□□ 0.58
USH1GQ495M9 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
USH1GQ495M9 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.68■□□□□ 0.58
USH1GQ495M9 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
USH1GQ495M9 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
USH1GQ495M9 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.68■□□□□ 0.58
USH1GQ495M9 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC18.68■□□□□ 0.58
USH1GQ495M9 LINC02560-201ENST00000596379 459 ntBASIC18.68■□□□□ 0.58
USH1GQ495M9 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.68■□□□□ 0.58
USH1GQ495M9 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USH1GQ495M9 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
USH1GQ495M9 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
USH1GQ495M9 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
USH1GQ495M9 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USH1GQ495M9 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.68■□□□□ 0.58
USH1GQ495M9 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USH1GQ495M9 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.68■□□□□ 0.58
USH1GQ495M9 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
USH1GQ495M9 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USH1GQ495M9 TDG-209ENST00000544861 1387 ntTSL 2 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms