Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC091167.2-201ENST00000579581 588 ntBASIC18.98■□□□□ 0.63
CCDC144BQ3MJ40 AC027307.2-201ENST00000591252 911 ntBASIC18.98■□□□□ 0.63
CCDC144BQ3MJ40 MIR6080-201ENST00000617359 66 ntBASIC18.98■□□□□ 0.63
CCDC144BQ3MJ40 AF228730.6-201ENST00000641497 218 ntBASIC18.98■□□□□ 0.63
CCDC144BQ3MJ40 AC084121.3-201ENST00000641716 218 ntBASIC18.98■□□□□ 0.63
CCDC144BQ3MJ40 AC105233.6-201ENST00000642093 218 ntBASIC18.98■□□□□ 0.63
CCDC144BQ3MJ40 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC144BQ3MJ40 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
CCDC144BQ3MJ40 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CCDC144BQ3MJ40 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC18.98■□□□□ 0.63
CCDC144BQ3MJ40 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC144BQ3MJ40 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC144BQ3MJ40 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC144BQ3MJ40 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC144BQ3MJ40 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC144BQ3MJ40 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC144BQ3MJ40 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC144BQ3MJ40 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC144BQ3MJ40 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC144BQ3MJ40 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC144BQ3MJ40 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
CCDC144BQ3MJ40 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC144BQ3MJ40 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC144BQ3MJ40 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC144BQ3MJ40 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC144BQ3MJ40 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
CCDC144BQ3MJ40 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.97■□□□□ 0.63
CCDC144BQ3MJ40 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.97■□□□□ 0.63
CCDC144BQ3MJ40 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.97■□□□□ 0.63
CCDC144BQ3MJ40 TERF1P3-201ENST00000505638 1227 ntBASIC18.97■□□□□ 0.63
CCDC144BQ3MJ40 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.97■□□□□ 0.63
CCDC144BQ3MJ40 AP000842.3-202ENST00000569238 1080 ntBASIC18.97■□□□□ 0.63
CCDC144BQ3MJ40 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
CCDC144BQ3MJ40 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC144BQ3MJ40 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC144BQ3MJ40 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC144BQ3MJ40 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC144BQ3MJ40 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC144BQ3MJ40 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC144BQ3MJ40 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC144BQ3MJ40 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.97■□□□□ 0.63
CCDC144BQ3MJ40 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CCDC144BQ3MJ40 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC144BQ3MJ40 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC144BQ3MJ40 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC144BQ3MJ40 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC144BQ3MJ40 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC144BQ3MJ40 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC144BQ3MJ40 AC092850.2-201ENST00000623821 2697 ntBASIC18.97■□□□□ 0.63
CCDC144BQ3MJ40 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC144BQ3MJ40 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.97■□□□□ 0.63
CCDC144BQ3MJ40 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CCDC144BQ3MJ40 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC144BQ3MJ40 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CCDC144BQ3MJ40 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC144BQ3MJ40 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC144BQ3MJ40 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC144BQ3MJ40 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC144BQ3MJ40 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC144BQ3MJ40 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC144BQ3MJ40 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC144BQ3MJ40 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC144BQ3MJ40 MIR346-201ENST00000362234 95 ntBASIC18.96■□□□□ 0.63
CCDC144BQ3MJ40 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.96■□□□□ 0.63
CCDC144BQ3MJ40 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CCDC144BQ3MJ40 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC144BQ3MJ40 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CCDC144BQ3MJ40 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC18.96■□□□□ 0.63
CCDC144BQ3MJ40 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC144BQ3MJ40 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.96■□□□□ 0.63
CCDC144BQ3MJ40 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CCDC144BQ3MJ40 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC144BQ3MJ40 AC087641.1-201ENST00000557561 1021 ntBASIC18.96■□□□□ 0.63
CCDC144BQ3MJ40 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.96■□□□□ 0.63
CCDC144BQ3MJ40 AL158211.3-201ENST00000607385 239 ntBASIC18.96■□□□□ 0.63
CCDC144BQ3MJ40 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC144BQ3MJ40 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC144BQ3MJ40 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC144BQ3MJ40 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CCDC144BQ3MJ40 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.96■□□□□ 0.63
CCDC144BQ3MJ40 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC144BQ3MJ40 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC144BQ3MJ40 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC144BQ3MJ40 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC144BQ3MJ40 MBP-202ENST00000355994 2772 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC144BQ3MJ40 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CCDC144BQ3MJ40 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC144BQ3MJ40 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC144BQ3MJ40 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC144BQ3MJ40 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC18.96■□□□□ 0.63
CCDC144BQ3MJ40 AL645728.1-201ENST00000366221 2101 ntBASIC18.95■□□□□ 0.62
CCDC144BQ3MJ40 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC144BQ3MJ40 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC144BQ3MJ40 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC144BQ3MJ40 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC144BQ3MJ40 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC144BQ3MJ40 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC144BQ3MJ40 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC144BQ3MJ40 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC144BQ3MJ40 RAC2-204ENST00000406508 893 ntTSL 5 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms