Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL16A1Q07092 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
COL16A1Q07092 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL16A1Q07092 AL354989.2-201ENST00000435838 1540 ntBASIC21.5■■□□□ 1.03
COL16A1Q07092 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
COL16A1Q07092 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC21.5■■□□□ 1.03
COL16A1Q07092 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL16A1Q07092 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
COL16A1Q07092 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
COL16A1Q07092 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
COL16A1Q07092 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL16A1Q07092 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL16A1Q07092 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL16A1Q07092 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
COL16A1Q07092 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL16A1Q07092 SMS-201ENST00000379404 1174 ntTSL 3 BASIC21.49■■□□□ 1.03
COL16A1Q07092 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC21.49■■□□□ 1.03
COL16A1Q07092 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC21.49■■□□□ 1.03
COL16A1Q07092 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC21.49■■□□□ 1.03
COL16A1Q07092 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC21.49■■□□□ 1.03
COL16A1Q07092 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC21.49■■□□□ 1.03
COL16A1Q07092 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
COL16A1Q07092 AL353726.2-201ENST00000623259 884 ntBASIC21.49■■□□□ 1.03
COL16A1Q07092 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL16A1Q07092 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL16A1Q07092 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL16A1Q07092 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL16A1Q07092 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC21.49■■□□□ 1.03
COL16A1Q07092 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
COL16A1Q07092 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
COL16A1Q07092 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
COL16A1Q07092 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL16A1Q07092 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
COL16A1Q07092 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC21.48■■□□□ 1.03
COL16A1Q07092 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
COL16A1Q07092 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
COL16A1Q07092 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL16A1Q07092 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC21.48■■□□□ 1.03
COL16A1Q07092 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC21.48■■□□□ 1.03
COL16A1Q07092 AC234782.1-201ENST00000451950 919 ntBASIC21.48■■□□□ 1.03
COL16A1Q07092 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
COL16A1Q07092 KRT18P25-201ENST00000508931 1278 ntBASIC21.48■■□□□ 1.03
COL16A1Q07092 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC21.48■■□□□ 1.03
COL16A1Q07092 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC21.48■■□□□ 1.03
COL16A1Q07092 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
COL16A1Q07092 RN7SL774P-201ENST00000577467 290 ntBASIC21.48■■□□□ 1.03
COL16A1Q07092 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
COL16A1Q07092 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC21.48■■□□□ 1.03
COL16A1Q07092 AC007663.3-201ENST00000609632 465 ntBASIC21.48■■□□□ 1.03
COL16A1Q07092 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
COL16A1Q07092 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL16A1Q07092 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC21.48■■□□□ 1.03
COL16A1Q07092 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.48■■□□□ 1.03
COL16A1Q07092 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL16A1Q07092 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC21.48■■□□□ 1.03
COL16A1Q07092 TUBBP5-203ENST00000508529 1334 ntBASIC21.48■■□□□ 1.03
COL16A1Q07092 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL16A1Q07092 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL16A1Q07092 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC21.48■■□□□ 1.03
COL16A1Q07092 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL16A1Q07092 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
COL16A1Q07092 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC21.48■■□□□ 1.03
COL16A1Q07092 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
COL16A1Q07092 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
COL16A1Q07092 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC21.48■■□□□ 1.03
COL16A1Q07092 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
COL16A1Q07092 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
COL16A1Q07092 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL16A1Q07092 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL16A1Q07092 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
COL16A1Q07092 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL16A1Q07092 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
COL16A1Q07092 ACTBP8-201ENST00000403258 1108 ntBASIC21.47■■□□□ 1.03
COL16A1Q07092 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC21.47■■□□□ 1.03
COL16A1Q07092 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC21.47■■□□□ 1.03
COL16A1Q07092 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.47■■□□□ 1.03
COL16A1Q07092 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC21.47■■□□□ 1.03
COL16A1Q07092 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC21.47■■□□□ 1.03
COL16A1Q07092 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC21.47■■□□□ 1.03
COL16A1Q07092 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
COL16A1Q07092 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
COL16A1Q07092 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC21.47■■□□□ 1.03
COL16A1Q07092 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
COL16A1Q07092 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC21.47■■□□□ 1.03
COL16A1Q07092 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
COL16A1Q07092 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
COL16A1Q07092 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC21.47■■□□□ 1.03
COL16A1Q07092 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL16A1Q07092 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC21.47■■□□□ 1.03
COL16A1Q07092 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
COL16A1Q07092 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
COL16A1Q07092 CD8B2-202ENST00000417670 633 ntBASIC21.47■■□□□ 1.03
COL16A1Q07092 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC21.47■■□□□ 1.03
COL16A1Q07092 LY6E-208ENST00000520531 490 ntTSL 2 BASIC21.47■■□□□ 1.03
COL16A1Q07092 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC21.47■■□□□ 1.03
COL16A1Q07092 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC21.47■■□□□ 1.03
COL16A1Q07092 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
COL16A1Q07092 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
COL16A1Q07092 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
COL16A1Q07092 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms