Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
GABPAQ06546 AL132655.2-201ENST00000596276 594 ntBASIC19.04■□□□□ 0.64
GABPAQ06546 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
GABPAQ06546 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
GABPAQ06546 MIR6069-201ENST00000620069 79 ntBASIC19.04■□□□□ 0.64
GABPAQ06546 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
GABPAQ06546 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
GABPAQ06546 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.04■□□□□ 0.64
GABPAQ06546 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.04■□□□□ 0.64
GABPAQ06546 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
GABPAQ06546 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
GABPAQ06546 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.04■□□□□ 0.64
GABPAQ06546 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GABPAQ06546 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
GABPAQ06546 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
GABPAQ06546 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
GABPAQ06546 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
GABPAQ06546 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.03■□□□□ 0.64
GABPAQ06546 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GABPAQ06546 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GABPAQ06546 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC19.03■□□□□ 0.64
GABPAQ06546 RAD18-204ENST00000418463 563 ntTSL 4 BASIC19.03■□□□□ 0.64
GABPAQ06546 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC19.03■□□□□ 0.64
GABPAQ06546 RAD18-205ENST00000421052 582 ntTSL 3 BASIC19.03■□□□□ 0.64
GABPAQ06546 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GABPAQ06546 GAPDHP21-201ENST00000450301 1010 ntBASIC19.03■□□□□ 0.64
GABPAQ06546 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
GABPAQ06546 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC19.03■□□□□ 0.64
GABPAQ06546 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC19.03■□□□□ 0.64
GABPAQ06546 CDK4-206ENST00000549606 558 ntTSL 2 BASIC19.03■□□□□ 0.64
GABPAQ06546 AL596325.1-201ENST00000563991 1082 ntBASIC19.03■□□□□ 0.64
GABPAQ06546 TP53TG3HP-202ENST00000569755 579 ntBASIC19.03■□□□□ 0.64
GABPAQ06546 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC19.03■□□□□ 0.64
GABPAQ06546 AC025048.3-201ENST00000590609 569 ntBASIC19.03■□□□□ 0.64
GABPAQ06546 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC19.03■□□□□ 0.64
GABPAQ06546 AC005702.4-201ENST00000618393 416 ntBASIC19.03■□□□□ 0.64
GABPAQ06546 AL035252.4-201ENST00000624174 288 ntBASIC19.03■□□□□ 0.64
GABPAQ06546 AC004461.2-201ENST00000629517 803 ntBASIC19.03■□□□□ 0.64
GABPAQ06546 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.03■□□□□ 0.64
GABPAQ06546 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC19.03■□□□□ 0.64
GABPAQ06546 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC19.03■□□□□ 0.64
GABPAQ06546 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC19.03■□□□□ 0.64
GABPAQ06546 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
GABPAQ06546 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
GABPAQ06546 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
GABPAQ06546 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC19.03■□□□□ 0.64
GABPAQ06546 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
GABPAQ06546 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
GABPAQ06546 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
GABPAQ06546 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.03■□□□□ 0.64
GABPAQ06546 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
GABPAQ06546 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GABPAQ06546 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GABPAQ06546 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
GABPAQ06546 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GABPAQ06546 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GABPAQ06546 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
GABPAQ06546 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC19.02■□□□□ 0.64
GABPAQ06546 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC19.02■□□□□ 0.64
GABPAQ06546 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.02■□□□□ 0.64
GABPAQ06546 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GABPAQ06546 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GABPAQ06546 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GABPAQ06546 GRAP-202ENST00000395635 834 ntTSL 2 BASIC19.02■□□□□ 0.64
GABPAQ06546 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GABPAQ06546 AL353779.1-201ENST00000434793 351 ntBASIC19.02■□□□□ 0.64
GABPAQ06546 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC19.02■□□□□ 0.64
GABPAQ06546 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC19.02■□□□□ 0.64
GABPAQ06546 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GABPAQ06546 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC19.02■□□□□ 0.64
GABPAQ06546 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC19.02■□□□□ 0.64
GABPAQ06546 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC19.02■□□□□ 0.64
GABPAQ06546 SRD5A3P1-201ENST00000603021 949 ntBASIC19.02■□□□□ 0.64
GABPAQ06546 CECR7-204ENST00000609932 568 ntTSL 2 BASIC19.02■□□□□ 0.64
GABPAQ06546 SRP9-204ENST00000619790 377 ntTSL 2 BASIC19.02■□□□□ 0.64
GABPAQ06546 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC19.02■□□□□ 0.64
GABPAQ06546 AL109936.8-201ENST00000641772 604 ntBASIC19.02■□□□□ 0.64
GABPAQ06546 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
GABPAQ06546 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
GABPAQ06546 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
GABPAQ06546 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
GABPAQ06546 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC19.02■□□□□ 0.63
GABPAQ06546 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
GABPAQ06546 AC007541.1-201ENST00000570282 1469 ntBASIC19.02■□□□□ 0.63
GABPAQ06546 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC19.02■□□□□ 0.63
GABPAQ06546 AD000864.1-201ENST00000624076 2295 ntBASIC19.02■□□□□ 0.63
GABPAQ06546 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
GABPAQ06546 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GABPAQ06546 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
GABPAQ06546 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.01■□□□□ 0.63
GABPAQ06546 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
GABPAQ06546 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
GABPAQ06546 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC19.01■□□□□ 0.63
GABPAQ06546 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
GABPAQ06546 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
GABPAQ06546 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GABPAQ06546 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
GABPAQ06546 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
GABPAQ06546 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GABPAQ06546 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms