Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC19.03■□□□□ 0.64
IRX3P78415 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC19.03■□□□□ 0.64
IRX3P78415 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.03■□□□□ 0.64
IRX3P78415 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
IRX3P78415 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
IRX3P78415 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
IRX3P78415 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
IRX3P78415 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
IRX3P78415 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
IRX3P78415 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
IRX3P78415 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
IRX3P78415 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
IRX3P78415 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
IRX3P78415 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
IRX3P78415 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.02■□□□□ 0.64
IRX3P78415 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
IRX3P78415 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC19.02■□□□□ 0.64
IRX3P78415 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
IRX3P78415 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
IRX3P78415 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
IRX3P78415 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.02■□□□□ 0.64
IRX3P78415 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
IRX3P78415 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
IRX3P78415 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
IRX3P78415 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
IRX3P78415 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC19.02■□□□□ 0.64
IRX3P78415 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
IRX3P78415 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
IRX3P78415 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
IRX3P78415 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
IRX3P78415 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC19.02■□□□□ 0.64
IRX3P78415 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC19.02■□□□□ 0.64
IRX3P78415 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC19.02■□□□□ 0.64
IRX3P78415 AC104794.3-201ENST00000566840 1248 ntBASIC19.02■□□□□ 0.64
IRX3P78415 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC19.02■□□□□ 0.64
IRX3P78415 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.02■□□□□ 0.64
IRX3P78415 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
IRX3P78415 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC19.02■□□□□ 0.64
IRX3P78415 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
IRX3P78415 BTBD7P1-201ENST00000447253 1453 ntBASIC19.02■□□□□ 0.63
IRX3P78415 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
IRX3P78415 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
IRX3P78415 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC19.01■□□□□ 0.63
IRX3P78415 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
IRX3P78415 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC19.01■□□□□ 0.63
IRX3P78415 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC19.01■□□□□ 0.63
IRX3P78415 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
IRX3P78415 MYB-242ENST00000618728 3545 ntTSL 5 BASIC19.01■□□□□ 0.63
IRX3P78415 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
IRX3P78415 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
IRX3P78415 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
IRX3P78415 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
IRX3P78415 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
IRX3P78415 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
IRX3P78415 AC098614.1-201ENST00000368528 745 ntBASIC19.01■□□□□ 0.63
IRX3P78415 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC19.01■□□□□ 0.63
IRX3P78415 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
IRX3P78415 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
IRX3P78415 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC19.01■□□□□ 0.63
IRX3P78415 ATP5G2P4-201ENST00000442175 420 ntBASIC19.01■□□□□ 0.63
IRX3P78415 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC19.01■□□□□ 0.63
IRX3P78415 GNAQP1-201ENST00000444815 1067 ntBASIC19.01■□□□□ 0.63
IRX3P78415 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
IRX3P78415 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC19.01■□□□□ 0.63
IRX3P78415 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
IRX3P78415 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
IRX3P78415 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
IRX3P78415 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
IRX3P78415 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC19.01■□□□□ 0.63
IRX3P78415 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
IRX3P78415 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
IRX3P78415 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
IRX3P78415 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.01■□□□□ 0.63
IRX3P78415 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19■□□□□ 0.63
IRX3P78415 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19■□□□□ 0.63
IRX3P78415 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC19■□□□□ 0.63
IRX3P78415 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
IRX3P78415 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC19■□□□□ 0.63
IRX3P78415 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
IRX3P78415 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC19■□□□□ 0.63
IRX3P78415 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
IRX3P78415 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19■□□□□ 0.63
IRX3P78415 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
IRX3P78415 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
IRX3P78415 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
IRX3P78415 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
IRX3P78415 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
IRX3P78415 RBM39-205ENST00000397370 612 ntTSL 2 BASIC19■□□□□ 0.63
IRX3P78415 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC19■□□□□ 0.63
IRX3P78415 DFFBP1-201ENST00000433250 979 ntBASIC19■□□□□ 0.63
IRX3P78415 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
IRX3P78415 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC19■□□□□ 0.63
IRX3P78415 MIR6752-201ENST00000618442 71 ntBASIC19■□□□□ 0.63
IRX3P78415 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
IRX3P78415 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
IRX3P78415 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
IRX3P78415 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
IRX3P78415 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
IRX3P78415 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
IRX3P78415 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms