Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
IRX4P78413 PCDHA1-201ENST00000378133 2726 ntBASIC17.09■□□□□ 0.33
IRX4P78413 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
IRX4P78413 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IRX4P78413 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
IRX4P78413 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
IRX4P78413 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
IRX4P78413 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
IRX4P78413 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
IRX4P78413 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.08■□□□□ 0.33
IRX4P78413 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
IRX4P78413 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
IRX4P78413 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.08■□□□□ 0.33
IRX4P78413 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
IRX4P78413 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
IRX4P78413 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
IRX4P78413 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.08■□□□□ 0.33
IRX4P78413 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
IRX4P78413 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
IRX4P78413 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
IRX4P78413 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
IRX4P78413 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
IRX4P78413 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.08■□□□□ 0.32
IRX4P78413 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
IRX4P78413 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
IRX4P78413 AC009336.1-201ENST00000608941 1553 ntBASIC17.08■□□□□ 0.32
IRX4P78413 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.08■□□□□ 0.32
IRX4P78413 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
IRX4P78413 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
IRX4P78413 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
IRX4P78413 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.08■□□□□ 0.32
IRX4P78413 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.08■□□□□ 0.32
IRX4P78413 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.08■□□□□ 0.32
IRX4P78413 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.08■□□□□ 0.32
IRX4P78413 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
IRX4P78413 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.08■□□□□ 0.32
IRX4P78413 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.08■□□□□ 0.32
IRX4P78413 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.08■□□□□ 0.32
IRX4P78413 AC124947.2-201ENST00000547118 1133 ntBASIC17.08■□□□□ 0.32
IRX4P78413 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.08■□□□□ 0.32
IRX4P78413 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.08■□□□□ 0.32
IRX4P78413 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
IRX4P78413 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.08■□□□□ 0.32
IRX4P78413 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.08■□□□□ 0.32
IRX4P78413 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.08■□□□□ 0.32
IRX4P78413 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.32
IRX4P78413 AF228730.6-201ENST00000641497 218 ntBASIC17.08■□□□□ 0.32
IRX4P78413 AC084121.3-201ENST00000641716 218 ntBASIC17.08■□□□□ 0.32
IRX4P78413 AC105233.6-201ENST00000642093 218 ntBASIC17.08■□□□□ 0.32
IRX4P78413 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
IRX4P78413 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.08■□□□□ 0.32
IRX4P78413 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
IRX4P78413 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.32
IRX4P78413 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.08■□□□□ 0.32
IRX4P78413 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
IRX4P78413 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
IRX4P78413 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.08■□□□□ 0.32
IRX4P78413 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
IRX4P78413 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
IRX4P78413 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
IRX4P78413 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
IRX4P78413 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
IRX4P78413 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
IRX4P78413 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.07■□□□□ 0.32
IRX4P78413 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.07■□□□□ 0.32
IRX4P78413 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
IRX4P78413 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
IRX4P78413 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
IRX4P78413 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
IRX4P78413 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
IRX4P78413 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
IRX4P78413 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC17.07■□□□□ 0.32
IRX4P78413 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
IRX4P78413 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
IRX4P78413 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.07■□□□□ 0.32
IRX4P78413 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
IRX4P78413 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
IRX4P78413 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.07■□□□□ 0.32
IRX4P78413 AC093214.1-201ENST00000511688 1107 ntBASIC17.07■□□□□ 0.32
IRX4P78413 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
IRX4P78413 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
IRX4P78413 Z92544.3-201ENST00000624747 417 ntBASIC17.07■□□□□ 0.32
IRX4P78413 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.07■□□□□ 0.32
IRX4P78413 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
IRX4P78413 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
IRX4P78413 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
IRX4P78413 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
IRX4P78413 AL596257.1-201ENST00000641463 2694 ntBASIC17.07■□□□□ 0.32
IRX4P78413 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
IRX4P78413 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
IRX4P78413 PCDHB17P-201ENST00000539533 2393 ntBASIC17.07■□□□□ 0.32
IRX4P78413 AL135999.2-201ENST00000622438 1686 ntBASIC17.07■□□□□ 0.32
IRX4P78413 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.07■□□□□ 0.32
IRX4P78413 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
IRX4P78413 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IRX4P78413 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
IRX4P78413 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
IRX4P78413 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
IRX4P78413 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IRX4P78413 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms