Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
AP1S1P61966 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
AP1S1P61966 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP1S1P61966 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.42■□□□□ 0.22
AP1S1P61966 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
AP1S1P61966 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP1S1P61966 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
AP1S1P61966 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
AP1S1P61966 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.41■□□□□ 0.22
AP1S1P61966 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
AP1S1P61966 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP1S1P61966 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.41■□□□□ 0.22
AP1S1P61966 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.41■□□□□ 0.22
AP1S1P61966 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.41■□□□□ 0.22
AP1S1P61966 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP1S1P61966 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
AP1S1P61966 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
AP1S1P61966 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP1S1P61966 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.41■□□□□ 0.22
AP1S1P61966 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.41■□□□□ 0.22
AP1S1P61966 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.41■□□□□ 0.22
AP1S1P61966 FAM86GP-201ENST00000448322 971 ntBASIC16.41■□□□□ 0.22
AP1S1P61966 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP1S1P61966 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.41■□□□□ 0.22
AP1S1P61966 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
AP1S1P61966 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.41■□□□□ 0.22
AP1S1P61966 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.41■□□□□ 0.22
AP1S1P61966 AC003101.2-201ENST00000612557 442 ntBASIC16.41■□□□□ 0.22
AP1S1P61966 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP1S1P61966 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.41■□□□□ 0.22
AP1S1P61966 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP1S1P61966 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
AP1S1P61966 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.41■□□□□ 0.22
AP1S1P61966 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP1S1P61966 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
AP1S1P61966 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
AP1S1P61966 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP1S1P61966 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP1S1P61966 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
AP1S1P61966 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
AP1S1P61966 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
AP1S1P61966 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
AP1S1P61966 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP1S1P61966 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
AP1S1P61966 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP1S1P61966 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
AP1S1P61966 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
AP1S1P61966 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.4■□□□□ 0.22
AP1S1P61966 AC008677.1-201ENST00000519230 1561 ntBASIC16.4■□□□□ 0.22
AP1S1P61966 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.4■□□□□ 0.22
AP1S1P61966 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
AP1S1P61966 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP1S1P61966 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
AP1S1P61966 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
AP1S1P61966 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
AP1S1P61966 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.4■□□□□ 0.22
AP1S1P61966 AL645939.2-201ENST00000427340 991 ntBASIC16.4■□□□□ 0.22
AP1S1P61966 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.4■□□□□ 0.22
AP1S1P61966 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.4■□□□□ 0.22
AP1S1P61966 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.4■□□□□ 0.22
AP1S1P61966 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.4■□□□□ 0.22
AP1S1P61966 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
AP1S1P61966 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
AP1S1P61966 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.4■□□□□ 0.22
AP1S1P61966 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
AP1S1P61966 AC006449.5-201ENST00000610658 2098 ntBASIC16.4■□□□□ 0.22
AP1S1P61966 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.4■□□□□ 0.22
AP1S1P61966 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP1S1P61966 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP1S1P61966 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP1S1P61966 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP1S1P61966 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.4■□□□□ 0.22
AP1S1P61966 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP1S1P61966 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP1S1P61966 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP1S1P61966 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
AP1S1P61966 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.39■□□□□ 0.22
AP1S1P61966 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
AP1S1P61966 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.39■□□□□ 0.22
AP1S1P61966 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
AP1S1P61966 AL035456.1-201ENST00000456064 1369 ntBASIC16.39■□□□□ 0.21
AP1S1P61966 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP1S1P61966 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP1S1P61966 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP1S1P61966 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP1S1P61966 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.39■□□□□ 0.21
AP1S1P61966 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
AP1S1P61966 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
AP1S1P61966 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.39■□□□□ 0.21
AP1S1P61966 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
AP1S1P61966 AC092364.2-201ENST00000596710 2692 ntBASIC16.39■□□□□ 0.21
AP1S1P61966 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
AP1S1P61966 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP1S1P61966 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP1S1P61966 CYP2T1P-202ENST00000641596 2535 ntBASIC16.39■□□□□ 0.21
AP1S1P61966 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
AP1S1P61966 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP1S1P61966 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
AP1S1P61966 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
AP1S1P61966 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms