Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ACTBP60709 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
ACTBP60709 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ACTBP60709 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
ACTBP60709 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ACTBP60709 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.12□□□□□ -0.15
ACTBP60709 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.12□□□□□ -0.15
ACTBP60709 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ACTBP60709 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ACTBP60709 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.12□□□□□ -0.15
ACTBP60709 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC14.12□□□□□ -0.15
ACTBP60709 AL020989.1-201ENST00000422979 469 ntBASIC14.12□□□□□ -0.15
ACTBP60709 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
ACTBP60709 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.12□□□□□ -0.15
ACTBP60709 AC096582.2-201ENST00000510860 516 ntBASIC14.12□□□□□ -0.15
ACTBP60709 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC14.12□□□□□ -0.15
ACTBP60709 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.12□□□□□ -0.15
ACTBP60709 AC012615.1-201ENST00000565797 1299 ntBASIC14.12□□□□□ -0.15
ACTBP60709 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
ACTBP60709 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
ACTBP60709 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ACTBP60709 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ACTBP60709 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.12□□□□□ -0.15
ACTBP60709 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ACTBP60709 KRT8P39-201ENST00000396270 1433 ntBASIC14.12□□□□□ -0.15
ACTBP60709 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.12□□□□□ -0.15
ACTBP60709 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ACTBP60709 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14.12□□□□□ -0.15
ACTBP60709 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ACTBP60709 AP002414.2-201ENST00000591780 3365 ntBASIC14.12□□□□□ -0.15
ACTBP60709 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ACTBP60709 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.12□□□□□ -0.15
ACTBP60709 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ACTBP60709 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ACTBP60709 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ACTBP60709 TP73-AS1-210ENST00000637775 1455 ntBASIC14.12□□□□□ -0.15
ACTBP60709 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
ACTBP60709 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.11□□□□□ -0.15
ACTBP60709 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ACTBP60709 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ACTBP60709 TOP3BP1-201ENST00000420768 1380 ntBASIC14.11□□□□□ -0.15
ACTBP60709 AC243591.1-201ENST00000452967 1364 ntBASIC14.11□□□□□ -0.15
ACTBP60709 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ACTBP60709 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ACTBP60709 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
ACTBP60709 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ACTBP60709 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ACTBP60709 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ACTBP60709 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ACTBP60709 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ACTBP60709 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
ACTBP60709 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ACTBP60709 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ACTBP60709 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ACTBP60709 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
ACTBP60709 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ACTBP60709 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.11□□□□□ -0.15
ACTBP60709 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ACTBP60709 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ACTBP60709 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14.11□□□□□ -0.15
ACTBP60709 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ACTBP60709 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ACTBP60709 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ACTBP60709 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
ACTBP60709 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ACTBP60709 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
ACTBP60709 IGHV3-47-201ENST00000425060 335 ntBASIC14.11□□□□□ -0.15
ACTBP60709 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.11□□□□□ -0.15
ACTBP60709 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
ACTBP60709 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
ACTBP60709 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.11□□□□□ -0.15
ACTBP60709 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ACTBP60709 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.11□□□□□ -0.15
ACTBP60709 AC011467.2-201ENST00000598425 242 ntBASIC14.11□□□□□ -0.15
ACTBP60709 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
ACTBP60709 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC14.11□□□□□ -0.15
ACTBP60709 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
ACTBP60709 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
ACTBP60709 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ACTBP60709 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ACTBP60709 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.11□□□□□ -0.15
ACTBP60709 SNX33P1-201ENST00000592116 1762 ntBASIC14.11□□□□□ -0.15
ACTBP60709 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.11□□□□□ -0.15
ACTBP60709 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ACTBP60709 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ACTBP60709 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ACTBP60709 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ACTBP60709 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.11□□□□□ -0.15
ACTBP60709 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.11□□□□□ -0.15
ACTBP60709 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ACTBP60709 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ACTBP60709 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ACTBP60709 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.1□□□□□ -0.15
ACTBP60709 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ACTBP60709 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ACTBP60709 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.1□□□□□ -0.15
ACTBP60709 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ACTBP60709 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ACTBP60709 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
ACTBP60709 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms