Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.77□□□□□ -0.04
SUMO3P55854 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.77□□□□□ -0.04
SUMO3P55854 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
SUMO3P55854 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SUMO3P55854 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SUMO3P55854 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SUMO3P55854 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SUMO3P55854 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SUMO3P55854 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.77□□□□□ -0.04
SUMO3P55854 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.77□□□□□ -0.04
SUMO3P55854 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SUMO3P55854 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SUMO3P55854 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.77□□□□□ -0.04
SUMO3P55854 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SUMO3P55854 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SUMO3P55854 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SUMO3P55854 AL662844.4-201ENST00000606367 2838 ntBASIC14.77□□□□□ -0.04
SUMO3P55854 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.77□□□□□ -0.04
SUMO3P55854 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SUMO3P55854 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SUMO3P55854 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
SUMO3P55854 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SUMO3P55854 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SUMO3P55854 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
SUMO3P55854 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.77□□□□□ -0.05
SUMO3P55854 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
SUMO3P55854 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.77□□□□□ -0.05
SUMO3P55854 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.77□□□□□ -0.05
SUMO3P55854 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.77□□□□□ -0.05
SUMO3P55854 AC093520.2-201ENST00000561830 333 ntBASIC14.77□□□□□ -0.05
SUMO3P55854 AC026979.3-201ENST00000607315 403 ntBASIC14.77□□□□□ -0.05
SUMO3P55854 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SUMO3P55854 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SUMO3P55854 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
SUMO3P55854 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
SUMO3P55854 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
SUMO3P55854 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SUMO3P55854 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC14.77□□□□□ -0.05
SUMO3P55854 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.77□□□□□ -0.05
SUMO3P55854 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SUMO3P55854 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
SUMO3P55854 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SUMO3P55854 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SUMO3P55854 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
SUMO3P55854 AP3S2-216ENST00000617003 1561 ntBASIC14.77□□□□□ -0.05
SUMO3P55854 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SUMO3P55854 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.76□□□□□ -0.05
SUMO3P55854 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.76□□□□□ -0.05
SUMO3P55854 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.76□□□□□ -0.05
SUMO3P55854 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SUMO3P55854 AP001282.1-201ENST00000531301 1499 ntBASIC14.76□□□□□ -0.05
SUMO3P55854 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.76□□□□□ -0.05
SUMO3P55854 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
SUMO3P55854 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.76□□□□□ -0.05
SUMO3P55854 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.76□□□□□ -0.05
SUMO3P55854 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
SUMO3P55854 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SUMO3P55854 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SUMO3P55854 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SUMO3P55854 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SUMO3P55854 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SUMO3P55854 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SUMO3P55854 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SUMO3P55854 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
SUMO3P55854 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SUMO3P55854 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SUMO3P55854 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.76□□□□□ -0.05
SUMO3P55854 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.76□□□□□ -0.05
SUMO3P55854 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.76□□□□□ -0.05
SUMO3P55854 ALG1L8P-201ENST00000533887 760 ntBASIC14.76□□□□□ -0.05
SUMO3P55854 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.76□□□□□ -0.05
SUMO3P55854 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.76□□□□□ -0.05
SUMO3P55854 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.76□□□□□ -0.05
SUMO3P55854 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
SUMO3P55854 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.76□□□□□ -0.05
SUMO3P55854 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.76□□□□□ -0.05
SUMO3P55854 AC026691.1-201ENST00000602502 2017 ntBASIC14.76□□□□□ -0.05
SUMO3P55854 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.76□□□□□ -0.05
SUMO3P55854 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SUMO3P55854 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.76□□□□□ -0.05
SUMO3P55854 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.76□□□□□ -0.05
SUMO3P55854 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SUMO3P55854 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.76□□□□□ -0.05
SUMO3P55854 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SUMO3P55854 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SUMO3P55854 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.76□□□□□ -0.05
SUMO3P55854 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.76□□□□□ -0.05
SUMO3P55854 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
SUMO3P55854 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.76□□□□□ -0.05
SUMO3P55854 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
SUMO3P55854 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SUMO3P55854 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SUMO3P55854 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
SUMO3P55854 DOC2GP-204ENST00000639052 2548 ntBASIC14.75□□□□□ -0.05
SUMO3P55854 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SUMO3P55854 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
SUMO3P55854 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.75□□□□□ -0.05
SUMO3P55854 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SUMO3P55854 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
SUMO3P55854 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms