Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDH12P55289 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.29■□□□□ 0.04
CDH12P55289 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.29■□□□□ 0.04
CDH12P55289 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
CDH12P55289 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH12P55289 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CDH12P55289 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CDH12P55289 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH12P55289 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.29■□□□□ 0.04
CDH12P55289 PMS2P1-201ENST00000431037 1228 ntBASIC15.29■□□□□ 0.04
CDH12P55289 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.29■□□□□ 0.04
CDH12P55289 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.29■□□□□ 0.04
CDH12P55289 AC107918.2-201ENST00000530817 355 ntBASIC15.29■□□□□ 0.04
CDH12P55289 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.29■□□□□ 0.04
CDH12P55289 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.29■□□□□ 0.04
CDH12P55289 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.29■□□□□ 0.04
CDH12P55289 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.29■□□□□ 0.04
CDH12P55289 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.29■□□□□ 0.04
CDH12P55289 GGTLC5P-201ENST00000617623 998 ntBASIC15.29■□□□□ 0.04
CDH12P55289 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.29■□□□□ 0.04
CDH12P55289 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH12P55289 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH12P55289 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH12P55289 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CDH12P55289 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.29■□□□□ 0.04
CDH12P55289 AC023824.1-201ENST00000562945 2975 ntBASIC15.29■□□□□ 0.04
CDH12P55289 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.29■□□□□ 0.04
CDH12P55289 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.29■□□□□ 0.04
CDH12P55289 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CDH12P55289 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH12P55289 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH12P55289 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CDH12P55289 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH12P55289 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH12P55289 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH12P55289 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH12P55289 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH12P55289 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.29■□□□□ 0.04
CDH12P55289 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.29■□□□□ 0.04
CDH12P55289 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.28■□□□□ 0.04
CDH12P55289 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH12P55289 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH12P55289 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDH12P55289 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.28■□□□□ 0.04
CDH12P55289 AC126755.1-201ENST00000525846 6405 ntBASIC15.28■□□□□ 0.04
CDH12P55289 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH12P55289 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH12P55289 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDH12P55289 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH12P55289 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
CDH12P55289 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CDH12P55289 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CDH12P55289 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CDH12P55289 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH12P55289 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH12P55289 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH12P55289 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH12P55289 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.28■□□□□ 0.04
CDH12P55289 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.28■□□□□ 0.04
CDH12P55289 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.28■□□□□ 0.04
CDH12P55289 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC15.28■□□□□ 0.04
CDH12P55289 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH12P55289 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.28■□□□□ 0.04
CDH12P55289 AC136632.2-201ENST00000512891 861 ntBASIC15.28■□□□□ 0.04
CDH12P55289 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.28■□□□□ 0.04
CDH12P55289 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH12P55289 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH12P55289 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.28■□□□□ 0.04
CDH12P55289 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.28■□□□□ 0.04
CDH12P55289 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH12P55289 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDH12P55289 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH12P55289 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
CDH12P55289 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH12P55289 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH12P55289 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CDH12P55289 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CDH12P55289 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CDH12P55289 AC073347.1-201ENST00000421633 2643 ntBASIC15.28■□□□□ 0.04
CDH12P55289 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDH12P55289 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDH12P55289 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.28■□□□□ 0.04
CDH12P55289 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH12P55289 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH12P55289 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH12P55289 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDH12P55289 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDH12P55289 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CDH12P55289 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.27■□□□□ 0.04
CDH12P55289 AL353732.1-201ENST00000569618 1459 ntBASIC15.27■□□□□ 0.04
CDH12P55289 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH12P55289 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.27■□□□□ 0.04
CDH12P55289 AL513477.1-201ENST00000602865 2407 ntBASIC15.27■□□□□ 0.04
CDH12P55289 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.27■□□□□ 0.04
CDH12P55289 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDH12P55289 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH12P55289 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH12P55289 AC112504.1-201ENST00000623415 1841 ntBASIC15.27■□□□□ 0.04
CDH12P55289 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.27■□□□□ 0.04
CDH12P55289 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms