Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDKN2DP55273 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDKN2DP55273 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDKN2DP55273 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDKN2DP55273 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
CDKN2DP55273 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDKN2DP55273 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.14■□□□□ 0.17
CDKN2DP55273 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDKN2DP55273 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDKN2DP55273 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.14■□□□□ 0.17
CDKN2DP55273 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.14■□□□□ 0.17
CDKN2DP55273 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.14■□□□□ 0.17
CDKN2DP55273 KRT18P3-201ENST00000451602 1288 ntBASIC16.14■□□□□ 0.17
CDKN2DP55273 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CDKN2DP55273 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.14■□□□□ 0.17
CDKN2DP55273 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CDKN2DP55273 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.14■□□□□ 0.17
CDKN2DP55273 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.14■□□□□ 0.17
CDKN2DP55273 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDKN2DP55273 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDKN2DP55273 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDKN2DP55273 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.14■□□□□ 0.17
CDKN2DP55273 AL589702.1-201ENST00000641229 1509 ntBASIC16.14■□□□□ 0.17
CDKN2DP55273 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDKN2DP55273 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDKN2DP55273 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDKN2DP55273 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.13■□□□□ 0.17
CDKN2DP55273 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDKN2DP55273 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.13■□□□□ 0.17
CDKN2DP55273 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDKN2DP55273 PRAL-201ENST00000624952 3286 ntBASIC16.13■□□□□ 0.17
CDKN2DP55273 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CDKN2DP55273 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDKN2DP55273 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.13■□□□□ 0.17
CDKN2DP55273 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.13■□□□□ 0.17
CDKN2DP55273 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.13■□□□□ 0.17
CDKN2DP55273 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDKN2DP55273 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDKN2DP55273 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDKN2DP55273 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDKN2DP55273 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDKN2DP55273 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDKN2DP55273 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDKN2DP55273 AL591424.1-201ENST00000442569 1213 ntBASIC16.13■□□□□ 0.17
CDKN2DP55273 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDKN2DP55273 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.13■□□□□ 0.17
CDKN2DP55273 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.13■□□□□ 0.17
CDKN2DP55273 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.13■□□□□ 0.17
CDKN2DP55273 FAM197Y3-203ENST00000618346 717 ntBASIC16.13■□□□□ 0.17
CDKN2DP55273 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.13■□□□□ 0.17
CDKN2DP55273 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDKN2DP55273 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDKN2DP55273 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.13■□□□□ 0.17
CDKN2DP55273 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDKN2DP55273 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.13■□□□□ 0.17
CDKN2DP55273 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDKN2DP55273 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDKN2DP55273 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDKN2DP55273 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDKN2DP55273 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDKN2DP55273 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDKN2DP55273 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.13■□□□□ 0.17
CDKN2DP55273 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDKN2DP55273 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CDKN2DP55273 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDKN2DP55273 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDKN2DP55273 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDKN2DP55273 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDKN2DP55273 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDKN2DP55273 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDKN2DP55273 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDKN2DP55273 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDKN2DP55273 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDKN2DP55273 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDKN2DP55273 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.12■□□□□ 0.17
CDKN2DP55273 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDKN2DP55273 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDKN2DP55273 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.12■□□□□ 0.17
CDKN2DP55273 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDKN2DP55273 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDKN2DP55273 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
CDKN2DP55273 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
CDKN2DP55273 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDKN2DP55273 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDKN2DP55273 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.12■□□□□ 0.17
CDKN2DP55273 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDKN2DP55273 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CDKN2DP55273 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDKN2DP55273 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CDKN2DP55273 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CDKN2DP55273 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDKN2DP55273 PRYP6-201ENST00000514804 343 ntBASIC16.12■□□□□ 0.17
CDKN2DP55273 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDKN2DP55273 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.12■□□□□ 0.17
CDKN2DP55273 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.12■□□□□ 0.17
CDKN2DP55273 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.12■□□□□ 0.17
CDKN2DP55273 AL138918.1-201ENST00000568306 659 ntBASIC16.12■□□□□ 0.17
CDKN2DP55273 AC002347.1-201ENST00000569543 541 ntBASIC16.12■□□□□ 0.17
CDKN2DP55273 AL161645.1-201ENST00000622716 1255 ntBASIC16.12■□□□□ 0.17
CDKN2DP55273 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms