Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.5■□□□□ 0.39
RAD23BP54727 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.5■□□□□ 0.39
RAD23BP54727 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.5■□□□□ 0.39
RAD23BP54727 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
RAD23BP54727 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.5■□□□□ 0.39
RAD23BP54727 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAD23BP54727 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
RAD23BP54727 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAD23BP54727 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.5■□□□□ 0.39
RAD23BP54727 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.5■□□□□ 0.39
RAD23BP54727 FOXO1B-201ENST00000504678 1527 ntBASIC17.5■□□□□ 0.39
RAD23BP54727 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAD23BP54727 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.5■□□□□ 0.39
RAD23BP54727 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.5■□□□□ 0.39
RAD23BP54727 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
RAD23BP54727 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAD23BP54727 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAD23BP54727 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.5■□□□□ 0.39
RAD23BP54727 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RAD23BP54727 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.5■□□□□ 0.39
RAD23BP54727 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
RAD23BP54727 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAD23BP54727 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAD23BP54727 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.49■□□□□ 0.39
RAD23BP54727 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RAD23BP54727 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RAD23BP54727 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.49■□□□□ 0.39
RAD23BP54727 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RAD23BP54727 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.49■□□□□ 0.39
RAD23BP54727 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RAD23BP54727 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAD23BP54727 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAD23BP54727 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAD23BP54727 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAD23BP54727 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
RAD23BP54727 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
RAD23BP54727 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.49■□□□□ 0.39
RAD23BP54727 AL592309.1-201ENST00000443127 649 ntBASIC17.49■□□□□ 0.39
RAD23BP54727 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.49■□□□□ 0.39
RAD23BP54727 AC069335.1-201ENST00000489972 472 ntBASIC17.49■□□□□ 0.39
RAD23BP54727 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RAD23BP54727 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.49■□□□□ 0.39
RAD23BP54727 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.49■□□□□ 0.39
RAD23BP54727 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.49■□□□□ 0.39
RAD23BP54727 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.49■□□□□ 0.39
RAD23BP54727 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.49■□□□□ 0.39
RAD23BP54727 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.49■□□□□ 0.39
RAD23BP54727 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.49■□□□□ 0.39
RAD23BP54727 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.49■□□□□ 0.39
RAD23BP54727 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.49■□□□□ 0.39
RAD23BP54727 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAD23BP54727 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RAD23BP54727 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
RAD23BP54727 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAD23BP54727 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
RAD23BP54727 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RAD23BP54727 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RAD23BP54727 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
RAD23BP54727 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAD23BP54727 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.49■□□□□ 0.39
RAD23BP54727 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.49■□□□□ 0.39
RAD23BP54727 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAD23BP54727 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.49■□□□□ 0.39
RAD23BP54727 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.49■□□□□ 0.39
RAD23BP54727 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAD23BP54727 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAD23BP54727 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.49■□□□□ 0.39
RAD23BP54727 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.49■□□□□ 0.39
RAD23BP54727 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RAD23BP54727 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAD23BP54727 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAD23BP54727 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAD23BP54727 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAD23BP54727 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAD23BP54727 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RAD23BP54727 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.48■□□□□ 0.39
RAD23BP54727 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
RAD23BP54727 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.48■□□□□ 0.39
RAD23BP54727 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
RAD23BP54727 REXO1L8P-201ENST00000604378 1897 ntBASIC17.48■□□□□ 0.39
RAD23BP54727 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RAD23BP54727 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.48■□□□□ 0.39
RAD23BP54727 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
RAD23BP54727 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.48■□□□□ 0.39
RAD23BP54727 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RAD23BP54727 MIR346-201ENST00000362234 95 ntBASIC17.48■□□□□ 0.39
RAD23BP54727 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.48■□□□□ 0.39
RAD23BP54727 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.48■□□□□ 0.39
RAD23BP54727 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RAD23BP54727 AP006288.1-201ENST00000446065 395 ntBASIC17.48■□□□□ 0.39
RAD23BP54727 AC004967.1-201ENST00000453589 447 ntBASIC17.48■□□□□ 0.39
RAD23BP54727 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
RAD23BP54727 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
RAD23BP54727 AC093520.2-201ENST00000561830 333 ntBASIC17.48■□□□□ 0.39
RAD23BP54727 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.48■□□□□ 0.39
RAD23BP54727 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.48■□□□□ 0.39
RAD23BP54727 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.48■□□□□ 0.39
RAD23BP54727 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
RAD23BP54727 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RAD23BP54727 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms