Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CENPFP49454 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CENPFP49454 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.11■□□□□ 0.49
CENPFP49454 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CENPFP49454 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CENPFP49454 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.11■□□□□ 0.49
CENPFP49454 AC024267.1-201ENST00000582320 895 ntBASIC18.11■□□□□ 0.49
CENPFP49454 AC005252.2-201ENST00000624630 1141 ntBASIC18.11■□□□□ 0.49
CENPFP49454 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CENPFP49454 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CENPFP49454 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC18.11■□□□□ 0.49
CENPFP49454 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CENPFP49454 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CENPFP49454 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CENPFP49454 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CENPFP49454 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CENPFP49454 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
CENPFP49454 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CENPFP49454 Z93015.1-201ENST00000451718 390 ntBASIC18.1■□□□□ 0.49
CENPFP49454 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC18.1■□□□□ 0.49
CENPFP49454 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CENPFP49454 HADH-212ENST00000638621 741 ntTSL 5 BASIC18.1■□□□□ 0.49
CENPFP49454 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
CENPFP49454 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC18.1■□□□□ 0.49
CENPFP49454 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.1■□□□□ 0.49
CENPFP49454 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CENPFP49454 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CENPFP49454 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CENPFP49454 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CENPFP49454 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CENPFP49454 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
CENPFP49454 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CENPFP49454 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.1■□□□□ 0.49
CENPFP49454 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CENPFP49454 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18.1■□□□□ 0.49
CENPFP49454 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC18.1■□□□□ 0.49
CENPFP49454 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CENPFP49454 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
CENPFP49454 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.1■□□□□ 0.49
CENPFP49454 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
CENPFP49454 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC18.1■□□□□ 0.49
CENPFP49454 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CENPFP49454 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CENPFP49454 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CENPFP49454 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CENPFP49454 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CENPFP49454 SOCS2P1-201ENST00000417727 557 ntBASIC18.1■□□□□ 0.49
CENPFP49454 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC18.1■□□□□ 0.49
CENPFP49454 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC18.1■□□□□ 0.49
CENPFP49454 RN7SL555P-201ENST00000584742 339 ntBASIC18.1■□□□□ 0.49
CENPFP49454 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
CENPFP49454 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.09■□□□□ 0.49
CENPFP49454 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CENPFP49454 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.09■□□□□ 0.49
CENPFP49454 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CENPFP49454 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CENPFP49454 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CENPFP49454 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC18.09■□□□□ 0.49
CENPFP49454 AL591846.1-201ENST00000451736 433 ntBASIC18.09■□□□□ 0.49
CENPFP49454 AC104306.2-201ENST00000451877 341 ntBASIC18.09■□□□□ 0.49
CENPFP49454 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CENPFP49454 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CENPFP49454 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.09■□□□□ 0.49
CENPFP49454 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CENPFP49454 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CENPFP49454 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CENPFP49454 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CENPFP49454 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CENPFP49454 RPL13P2-201ENST00000440687 659 ntBASIC18.09■□□□□ 0.49
CENPFP49454 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CENPFP49454 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC18.09■□□□□ 0.49
CENPFP49454 ADM-202ENST00000524948 584 ntTSL 2 BASIC18.09■□□□□ 0.49
CENPFP49454 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
CENPFP49454 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC18.09■□□□□ 0.49
CENPFP49454 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC18.09■□□□□ 0.49
CENPFP49454 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC18.09■□□□□ 0.49
CENPFP49454 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC18.09■□□□□ 0.49
CENPFP49454 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
CENPFP49454 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18.09■□□□□ 0.49
CENPFP49454 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CENPFP49454 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.08■□□□□ 0.49
CENPFP49454 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CENPFP49454 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC18.08■□□□□ 0.49
CENPFP49454 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC18.08■□□□□ 0.49
CENPFP49454 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
CENPFP49454 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC18.08■□□□□ 0.49
CENPFP49454 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CENPFP49454 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC18.08■□□□□ 0.49
CENPFP49454 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC18.08■□□□□ 0.49
CENPFP49454 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC18.08■□□□□ 0.49
CENPFP49454 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
CENPFP49454 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CENPFP49454 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CENPFP49454 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.08■□□□□ 0.49
CENPFP49454 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC18.08■□□□□ 0.49
CENPFP49454 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.08■□□□□ 0.49
CENPFP49454 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
CENPFP49454 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CENPFP49454 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
CENPFP49454 AC016694.1-201ENST00000434179 700 ntBASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms