Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1DP48730 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1DP48730 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.31■□□□□ 0.2
CSNK1DP48730 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.31■□□□□ 0.2
CSNK1DP48730 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CSNK1DP48730 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1DP48730 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1DP48730 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.31■□□□□ 0.2
CSNK1DP48730 MIR943-201ENST00000401286 94 ntBASIC16.31■□□□□ 0.2
CSNK1DP48730 MTND6P24-201ENST00000440466 518 ntBASIC16.31■□□□□ 0.2
CSNK1DP48730 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
CSNK1DP48730 AC097493.3-201ENST00000509725 367 ntBASIC16.31■□□□□ 0.2
CSNK1DP48730 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.31■□□□□ 0.2
CSNK1DP48730 AL079307.3-201ENST00000556114 283 ntBASIC16.31■□□□□ 0.2
CSNK1DP48730 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.31■□□□□ 0.2
CSNK1DP48730 AL589739.1-201ENST00000607720 493 ntBASIC16.31■□□□□ 0.2
CSNK1DP48730 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CSNK1DP48730 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1DP48730 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1DP48730 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1DP48730 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1DP48730 PKD1P1-201ENST00000458669 6805 ntBASIC16.31■□□□□ 0.2
CSNK1DP48730 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1DP48730 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1DP48730 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1DP48730 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
CSNK1DP48730 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
CSNK1DP48730 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1DP48730 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.3■□□□□ 0.2
CSNK1DP48730 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1DP48730 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CSNK1DP48730 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CSNK1DP48730 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1DP48730 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.3■□□□□ 0.2
CSNK1DP48730 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CSNK1DP48730 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.3■□□□□ 0.2
CSNK1DP48730 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1DP48730 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CSNK1DP48730 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1DP48730 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1DP48730 KRT8P12-202ENST00000472924 1397 ntBASIC16.3■□□□□ 0.2
CSNK1DP48730 FO538757.1-201ENST00000623083 1397 ntBASIC16.3■□□□□ 0.2
CSNK1DP48730 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1DP48730 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1DP48730 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CSNK1DP48730 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CSNK1DP48730 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CSNK1DP48730 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1DP48730 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.3■□□□□ 0.2
CSNK1DP48730 AC092580.3-201ENST00000430932 139 ntBASIC16.3■□□□□ 0.2
CSNK1DP48730 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1DP48730 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.3■□□□□ 0.2
CSNK1DP48730 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.3■□□□□ 0.2
CSNK1DP48730 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.3■□□□□ 0.2
CSNK1DP48730 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.3■□□□□ 0.2
CSNK1DP48730 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.3■□□□□ 0.2
CSNK1DP48730 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.3■□□□□ 0.2
CSNK1DP48730 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1DP48730 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1DP48730 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.3■□□□□ 0.2
CSNK1DP48730 AL136982.4-201ENST00000437689 1740 ntBASIC16.3■□□□□ 0.2
CSNK1DP48730 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1DP48730 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CSNK1DP48730 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.3■□□□□ 0.2
CSNK1DP48730 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.3■□□□□ 0.2
CSNK1DP48730 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1DP48730 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1DP48730 CYP4F24P-201ENST00000586049 1580 ntBASIC16.3■□□□□ 0.2
CSNK1DP48730 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSNK1DP48730 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSNK1DP48730 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.29■□□□□ 0.2
CSNK1DP48730 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.29■□□□□ 0.2
CSNK1DP48730 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CSNK1DP48730 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CSNK1DP48730 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CSNK1DP48730 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSNK1DP48730 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSNK1DP48730 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CSNK1DP48730 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CSNK1DP48730 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CSNK1DP48730 TREML5P-201ENST00000421694 576 ntBASIC16.29■□□□□ 0.2
CSNK1DP48730 EEF1DP4-201ENST00000446006 880 ntBASIC16.29■□□□□ 0.2
CSNK1DP48730 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.29■□□□□ 0.2
CSNK1DP48730 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.29■□□□□ 0.2
CSNK1DP48730 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.29■□□□□ 0.2
CSNK1DP48730 AL138828.2-201ENST00000615812 383 ntBASIC16.29■□□□□ 0.2
CSNK1DP48730 SPDYE12P-201ENST00000618416 771 ntBASIC16.29■□□□□ 0.2
CSNK1DP48730 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSNK1DP48730 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSNK1DP48730 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CSNK1DP48730 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSNK1DP48730 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSNK1DP48730 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSNK1DP48730 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CSNK1DP48730 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.29■□□□□ 0.2
CSNK1DP48730 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSNK1DP48730 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CSNK1DP48730 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CSNK1DP48730 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CSNK1DP48730 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms