Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.12■□□□□ 0.33
SLC1A1P43005 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC1A1P43005 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC1A1P43005 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC1A1P43005 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC1A1P43005 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC1A1P43005 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC1A1P43005 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC1A1P43005 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SLC1A1P43005 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC1A1P43005 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC1A1P43005 HAUS4P1-201ENST00000406739 1145 ntBASIC17.12■□□□□ 0.33
SLC1A1P43005 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC1A1P43005 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SLC1A1P43005 KRT126P-201ENST00000549467 1181 ntBASIC17.12■□□□□ 0.33
SLC1A1P43005 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SLC1A1P43005 SLC25A6P4-201ENST00000586535 553 ntBASIC17.12■□□□□ 0.33
SLC1A1P43005 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SLC1A1P43005 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
SLC1A1P43005 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.12■□□□□ 0.33
SLC1A1P43005 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
SLC1A1P43005 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC1A1P43005 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC1A1P43005 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC1A1P43005 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC1A1P43005 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC1A1P43005 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC1A1P43005 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC1A1P43005 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC1A1P43005 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
SLC1A1P43005 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC1A1P43005 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC1A1P43005 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC1A1P43005 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC1A1P43005 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC1A1P43005 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.11■□□□□ 0.33
SLC1A1P43005 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC1A1P43005 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC1A1P43005 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC1A1P43005 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SLC1A1P43005 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC1A1P43005 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC1A1P43005 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC1A1P43005 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.11■□□□□ 0.33
SLC1A1P43005 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
SLC1A1P43005 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC1A1P43005 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC1A1P43005 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.11■□□□□ 0.33
SLC1A1P43005 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.11■□□□□ 0.33
SLC1A1P43005 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.11■□□□□ 0.33
SLC1A1P43005 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.11■□□□□ 0.33
SLC1A1P43005 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.11■□□□□ 0.33
SLC1A1P43005 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC1A1P43005 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC1A1P43005 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.11■□□□□ 0.33
SLC1A1P43005 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC1A1P43005 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC1A1P43005 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC1A1P43005 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC1A1P43005 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SLC1A1P43005 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.11■□□□□ 0.33
SLC1A1P43005 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SLC1A1P43005 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC1A1P43005 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC1A1P43005 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC1A1P43005 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC1A1P43005 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
SLC1A1P43005 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A1P43005 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A1P43005 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A1P43005 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A1P43005 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC1A1P43005 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.1■□□□□ 0.33
SLC1A1P43005 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A1P43005 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A1P43005 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SLC1A1P43005 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC1A1P43005 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC1A1P43005 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A1P43005 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SLC1A1P43005 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC1A1P43005 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SLC1A1P43005 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SLC1A1P43005 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.1■□□□□ 0.33
SLC1A1P43005 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.1■□□□□ 0.33
SLC1A1P43005 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A1P43005 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SLC1A1P43005 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A1P43005 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A1P43005 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A1P43005 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A1P43005 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A1P43005 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SLC1A1P43005 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A1P43005 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC1A1P43005 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A1P43005 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A1P43005 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.09■□□□□ 0.33
SLC1A1P43005 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.09■□□□□ 0.33
SLC1A1P43005 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms