Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.79□□□□□ -0.04
APOBEC1P41238 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
APOBEC1P41238 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.79□□□□□ -0.04
APOBEC1P41238 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
APOBEC1P41238 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.79□□□□□ -0.04
APOBEC1P41238 AC092865.5-201ENST00000545435 363 ntBASIC14.79□□□□□ -0.04
APOBEC1P41238 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.79□□□□□ -0.04
APOBEC1P41238 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.79□□□□□ -0.04
APOBEC1P41238 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.79□□□□□ -0.04
APOBEC1P41238 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
APOBEC1P41238 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.79□□□□□ -0.04
APOBEC1P41238 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.79□□□□□ -0.04
APOBEC1P41238 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.79□□□□□ -0.04
APOBEC1P41238 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.79□□□□□ -0.04
APOBEC1P41238 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.79□□□□□ -0.04
APOBEC1P41238 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
APOBEC1P41238 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOBEC1P41238 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOBEC1P41238 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOBEC1P41238 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOBEC1P41238 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.79□□□□□ -0.04
APOBEC1P41238 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
APOBEC1P41238 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.79□□□□□ -0.04
APOBEC1P41238 DOC2GP-204ENST00000639052 2548 ntBASIC14.79□□□□□ -0.04
APOBEC1P41238 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOBEC1P41238 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
APOBEC1P41238 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOBEC1P41238 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
APOBEC1P41238 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.78□□□□□ -0.04
APOBEC1P41238 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
APOBEC1P41238 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOBEC1P41238 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
APOBEC1P41238 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
APOBEC1P41238 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.78□□□□□ -0.04
APOBEC1P41238 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOBEC1P41238 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOBEC1P41238 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOBEC1P41238 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
APOBEC1P41238 MIR346-201ENST00000362234 95 ntBASIC14.78□□□□□ -0.04
APOBEC1P41238 MIR648-201ENST00000385046 94 ntBASIC14.78□□□□□ -0.04
APOBEC1P41238 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOBEC1P41238 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.78□□□□□ -0.04
APOBEC1P41238 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
APOBEC1P41238 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.78□□□□□ -0.04
APOBEC1P41238 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
APOBEC1P41238 AL592309.1-201ENST00000443127 649 ntBASIC14.78□□□□□ -0.04
APOBEC1P41238 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.78□□□□□ -0.04
APOBEC1P41238 LINC01225-203ENST00000563550 1244 ntBASIC14.78□□□□□ -0.04
APOBEC1P41238 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.78□□□□□ -0.04
APOBEC1P41238 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.78□□□□□ -0.04
APOBEC1P41238 AC024267.1-201ENST00000582320 895 ntBASIC14.78□□□□□ -0.04
APOBEC1P41238 AC105339.1-204ENST00000636249 355 ntBASIC14.78□□□□□ -0.04
APOBEC1P41238 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOBEC1P41238 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
APOBEC1P41238 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOBEC1P41238 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.78□□□□□ -0.04
APOBEC1P41238 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOBEC1P41238 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOBEC1P41238 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOBEC1P41238 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.78□□□□□ -0.04
APOBEC1P41238 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOBEC1P41238 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
APOBEC1P41238 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
APOBEC1P41238 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
APOBEC1P41238 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOBEC1P41238 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOBEC1P41238 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.78□□□□□ -0.04
APOBEC1P41238 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
APOBEC1P41238 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.78□□□□□ -0.04
APOBEC1P41238 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.78□□□□□ -0.04
APOBEC1P41238 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
APOBEC1P41238 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
APOBEC1P41238 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
APOBEC1P41238 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
APOBEC1P41238 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
APOBEC1P41238 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
APOBEC1P41238 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
APOBEC1P41238 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.77□□□□□ -0.04
APOBEC1P41238 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
APOBEC1P41238 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
APOBEC1P41238 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
APOBEC1P41238 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
APOBEC1P41238 PCDH8P1-201ENST00000428983 2773 ntBASIC14.77□□□□□ -0.04
APOBEC1P41238 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
APOBEC1P41238 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
APOBEC1P41238 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
APOBEC1P41238 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.77□□□□□ -0.05
APOBEC1P41238 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.77□□□□□ -0.05
APOBEC1P41238 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.77□□□□□ -0.05
APOBEC1P41238 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
APOBEC1P41238 AC245100.5-201ENST00000452108 331 ntBASIC14.77□□□□□ -0.05
APOBEC1P41238 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.77□□□□□ -0.05
APOBEC1P41238 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.77□□□□□ -0.05
APOBEC1P41238 AP000842.3-202ENST00000569238 1080 ntBASIC14.77□□□□□ -0.05
APOBEC1P41238 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
APOBEC1P41238 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.77□□□□□ -0.05
APOBEC1P41238 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
APOBEC1P41238 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
APOBEC1P41238 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
APOBEC1P41238 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms