Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.9■□□□□ 0.46
USP8P40818 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.9■□□□□ 0.46
USP8P40818 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.9■□□□□ 0.46
USP8P40818 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
USP8P40818 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
USP8P40818 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP8P40818 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
USP8P40818 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
USP8P40818 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.9■□□□□ 0.46
USP8P40818 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP8P40818 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
USP8P40818 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
USP8P40818 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC17.9■□□□□ 0.46
USP8P40818 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP8P40818 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP8P40818 GGT3P-204ENST00000453783 1664 ntBASIC17.9■□□□□ 0.46
USP8P40818 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
USP8P40818 AC105917.1-201ENST00000506637 2539 ntBASIC17.9■□□□□ 0.46
USP8P40818 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP8P40818 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.46
USP8P40818 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.89■□□□□ 0.46
USP8P40818 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.46
USP8P40818 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
USP8P40818 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP8P40818 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP8P40818 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
USP8P40818 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
USP8P40818 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
USP8P40818 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.89■□□□□ 0.45
USP8P40818 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.89■□□□□ 0.45
USP8P40818 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.89■□□□□ 0.45
USP8P40818 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.89■□□□□ 0.45
USP8P40818 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.89■□□□□ 0.45
USP8P40818 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP8P40818 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.89■□□□□ 0.45
USP8P40818 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.89■□□□□ 0.45
USP8P40818 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
USP8P40818 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP8P40818 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP8P40818 ME2P1-201ENST00000426028 1970 ntBASIC17.89■□□□□ 0.45
USP8P40818 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP8P40818 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP8P40818 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP8P40818 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP8P40818 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.89■□□□□ 0.45
USP8P40818 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP8P40818 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP8P40818 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP8P40818 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP8P40818 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
USP8P40818 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP8P40818 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.89■□□□□ 0.45
USP8P40818 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
USP8P40818 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.89■□□□□ 0.45
USP8P40818 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.89■□□□□ 0.45
USP8P40818 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP8P40818 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP8P40818 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP8P40818 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
USP8P40818 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC17.88■□□□□ 0.45
USP8P40818 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC17.88■□□□□ 0.45
USP8P40818 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP8P40818 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.88■□□□□ 0.45
USP8P40818 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
USP8P40818 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
USP8P40818 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
USP8P40818 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
USP8P40818 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.88■□□□□ 0.45
USP8P40818 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP8P40818 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.88■□□□□ 0.45
USP8P40818 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP8P40818 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP8P40818 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.88■□□□□ 0.45
USP8P40818 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
USP8P40818 Z83851.2-201ENST00000609564 659 ntBASIC17.88■□□□□ 0.45
USP8P40818 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.88■□□□□ 0.45
USP8P40818 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP8P40818 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.88■□□□□ 0.45
USP8P40818 GGT4P-201ENST00000623672 1708 ntBASIC17.88■□□□□ 0.45
USP8P40818 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP8P40818 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
USP8P40818 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.88■□□□□ 0.45
USP8P40818 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP8P40818 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP8P40818 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
USP8P40818 AC104109.2-201ENST00000602919 1418 ntBASIC17.88■□□□□ 0.45
USP8P40818 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.88■□□□□ 0.45
USP8P40818 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
USP8P40818 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.88■□□□□ 0.45
USP8P40818 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
USP8P40818 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
USP8P40818 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
USP8P40818 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
USP8P40818 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
USP8P40818 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.88■□□□□ 0.45
USP8P40818 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
USP8P40818 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP8P40818 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
USP8P40818 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
USP8P40818 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms