Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.89■□□□□ 0.29
PTPN7P35236 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.89■□□□□ 0.29
PTPN7P35236 AC092384.3-202ENST00000564646 2873 ntBASIC16.89■□□□□ 0.29
PTPN7P35236 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN7P35236 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN7P35236 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.89■□□□□ 0.29
PTPN7P35236 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PTPN7P35236 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN7P35236 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
PTPN7P35236 AC025580.3-201ENST00000617932 1424 ntBASIC16.88■□□□□ 0.29
PTPN7P35236 AC011477.6-201ENST00000604980 1927 ntBASIC16.88■□□□□ 0.29
PTPN7P35236 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PTPN7P35236 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN7P35236 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.88■□□□□ 0.29
PTPN7P35236 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN7P35236 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
PTPN7P35236 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
PTPN7P35236 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.88■□□□□ 0.29
PTPN7P35236 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.88■□□□□ 0.29
PTPN7P35236 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.88■□□□□ 0.29
PTPN7P35236 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN7P35236 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN7P35236 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN7P35236 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN7P35236 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.88■□□□□ 0.29
PTPN7P35236 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN7P35236 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN7P35236 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN7P35236 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN7P35236 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN7P35236 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
PTPN7P35236 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN7P35236 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.88■□□□□ 0.29
PTPN7P35236 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.88■□□□□ 0.29
PTPN7P35236 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN7P35236 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.88■□□□□ 0.29
PTPN7P35236 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.88■□□□□ 0.29
PTPN7P35236 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.88■□□□□ 0.29
PTPN7P35236 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.88■□□□□ 0.29
PTPN7P35236 KRT19P2-202ENST00000557173 1012 ntBASIC16.88■□□□□ 0.29
PTPN7P35236 MIR4321-201ENST00000592276 80 ntBASIC16.88■□□□□ 0.29
PTPN7P35236 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN7P35236 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.88■□□□□ 0.29
PTPN7P35236 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.88■□□□□ 0.29
PTPN7P35236 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PTPN7P35236 AC004877.2-201ENST00000623941 599 ntBASIC16.88■□□□□ 0.29
PTPN7P35236 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN7P35236 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN7P35236 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN7P35236 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN7P35236 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN7P35236 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.88■□□□□ 0.29
PTPN7P35236 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN7P35236 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PTPN7P35236 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PTPN7P35236 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PTPN7P35236 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
PTPN7P35236 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN7P35236 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN7P35236 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.87■□□□□ 0.29
PTPN7P35236 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN7P35236 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN7P35236 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
PTPN7P35236 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN7P35236 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN7P35236 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN7P35236 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.87■□□□□ 0.29
PTPN7P35236 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.87■□□□□ 0.29
PTPN7P35236 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
PTPN7P35236 AC009078.2-202ENST00000463353 338 ntBASIC16.87■□□□□ 0.29
PTPN7P35236 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.87■□□□□ 0.29
PTPN7P35236 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
PTPN7P35236 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.87■□□□□ 0.29
PTPN7P35236 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.87■□□□□ 0.29
PTPN7P35236 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.87■□□□□ 0.29
PTPN7P35236 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.87■□□□□ 0.29
PTPN7P35236 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.87■□□□□ 0.29
PTPN7P35236 AC064836.3-201ENST00000607928 673 ntBASIC16.87■□□□□ 0.29
PTPN7P35236 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN7P35236 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN7P35236 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN7P35236 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN7P35236 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN7P35236 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.87■□□□□ 0.29
PTPN7P35236 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.87■□□□□ 0.29
PTPN7P35236 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.87■□□□□ 0.29
PTPN7P35236 BCAR1-209ENST00000546196 1340 ntBASIC16.87■□□□□ 0.29
PTPN7P35236 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN7P35236 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN7P35236 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.87■□□□□ 0.29
PTPN7P35236 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN7P35236 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN7P35236 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.87■□□□□ 0.29
PTPN7P35236 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.87■□□□□ 0.29
PTPN7P35236 AC022532.1-201ENST00000624563 1728 ntBASIC16.87■□□□□ 0.29
PTPN7P35236 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN7P35236 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PTPN7P35236 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN7P35236 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN7P35236 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms