Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC16.47■□□□□ 0.23
LSP1P33241 AC041040.2-201ENST00000622926 2899 ntBASIC16.47■□□□□ 0.23
LSP1P33241 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LSP1P33241 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LSP1P33241 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LSP1P33241 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
LSP1P33241 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.47■□□□□ 0.23
LSP1P33241 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.47■□□□□ 0.23
LSP1P33241 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
LSP1P33241 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC16.46■□□□□ 0.23
LSP1P33241 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
LSP1P33241 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.46■□□□□ 0.23
LSP1P33241 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
LSP1P33241 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LSP1P33241 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LSP1P33241 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
LSP1P33241 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC16.46■□□□□ 0.23
LSP1P33241 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LSP1P33241 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
LSP1P33241 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.46■□□□□ 0.23
LSP1P33241 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LSP1P33241 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LSP1P33241 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LSP1P33241 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LSP1P33241 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LSP1P33241 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.46■□□□□ 0.23
LSP1P33241 MIR662-201ENST00000384847 95 ntBASIC16.46■□□□□ 0.23
LSP1P33241 FAM8A6P-201ENST00000407496 1135 ntBASIC16.46■□□□□ 0.23
LSP1P33241 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LSP1P33241 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.46■□□□□ 0.23
LSP1P33241 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LSP1P33241 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.46■□□□□ 0.23
LSP1P33241 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.46■□□□□ 0.23
LSP1P33241 AL390719.2-201ENST00000606993 987 ntBASIC16.46■□□□□ 0.23
LSP1P33241 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LSP1P33241 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
LSP1P33241 AC090616.6-203ENST00000579186 1945 ntBASIC16.46■□□□□ 0.23
LSP1P33241 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LSP1P33241 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.46■□□□□ 0.23
LSP1P33241 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
LSP1P33241 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LSP1P33241 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
LSP1P33241 AC008677.1-201ENST00000519230 1561 ntBASIC16.46■□□□□ 0.23
LSP1P33241 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
LSP1P33241 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.46■□□□□ 0.22
LSP1P33241 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
LSP1P33241 AC112693.3-201ENST00000624819 1983 ntBASIC16.46■□□□□ 0.22
LSP1P33241 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC16.46■□□□□ 0.22
LSP1P33241 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
LSP1P33241 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LSP1P33241 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.45■□□□□ 0.22
LSP1P33241 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LSP1P33241 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LSP1P33241 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LSP1P33241 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LSP1P33241 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
LSP1P33241 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LSP1P33241 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LSP1P33241 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LSP1P33241 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LSP1P33241 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LSP1P33241 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
LSP1P33241 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
LSP1P33241 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.45■□□□□ 0.22
LSP1P33241 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LSP1P33241 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LSP1P33241 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LSP1P33241 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
LSP1P33241 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.45■□□□□ 0.22
LSP1P33241 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LSP1P33241 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LSP1P33241 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.45■□□□□ 0.22
LSP1P33241 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.45■□□□□ 0.22
LSP1P33241 AC073592.5-201ENST00000624854 528 ntBASIC16.45■□□□□ 0.22
LSP1P33241 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.45■□□□□ 0.22
LSP1P33241 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LSP1P33241 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LSP1P33241 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.45■□□□□ 0.22
LSP1P33241 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LSP1P33241 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
LSP1P33241 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.45■□□□□ 0.22
LSP1P33241 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.45■□□□□ 0.22
LSP1P33241 AGAP7P-201ENST00000582299 2062 ntBASIC16.45■□□□□ 0.22
LSP1P33241 AGAP14-201ENST00000624701 2060 ntBASIC16.45■□□□□ 0.22
LSP1P33241 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC16.45■□□□□ 0.22
LSP1P33241 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LSP1P33241 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LSP1P33241 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LSP1P33241 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
LSP1P33241 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LSP1P33241 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.45■□□□□ 0.22
LSP1P33241 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LSP1P33241 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
LSP1P33241 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
LSP1P33241 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
LSP1P33241 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LSP1P33241 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LSP1P33241 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LSP1P33241 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
LSP1P33241 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms