Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
HOXA11P31270 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXA11P31270 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXA11P31270 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXA11P31270 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.53■□□□□ 0.4
HOXA11P31270 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.53■□□□□ 0.4
HOXA11P31270 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXA11P31270 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HOXA11P31270 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXA11P31270 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXA11P31270 SPDYE19P-201ENST00000338590 713 ntBASIC17.53■□□□□ 0.4
HOXA11P31270 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HOXA11P31270 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXA11P31270 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.53■□□□□ 0.4
HOXA11P31270 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.53■□□□□ 0.4
HOXA11P31270 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HOXA11P31270 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HOXA11P31270 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HOXA11P31270 TP53TG3HP-202ENST00000569755 579 ntBASIC17.53■□□□□ 0.4
HOXA11P31270 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.53■□□□□ 0.4
HOXA11P31270 AC025048.3-201ENST00000590609 569 ntBASIC17.53■□□□□ 0.4
HOXA11P31270 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.53■□□□□ 0.4
HOXA11P31270 AC005702.4-201ENST00000618393 416 ntBASIC17.53■□□□□ 0.4
HOXA11P31270 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
HOXA11P31270 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
HOXA11P31270 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
HOXA11P31270 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXA11P31270 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXA11P31270 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HOXA11P31270 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HOXA11P31270 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.52■□□□□ 0.4
HOXA11P31270 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.52■□□□□ 0.4
HOXA11P31270 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.52■□□□□ 0.4
HOXA11P31270 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
HOXA11P31270 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
HOXA11P31270 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.52■□□□□ 0.4
HOXA11P31270 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HOXA11P31270 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HOXA11P31270 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HOXA11P31270 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HOXA11P31270 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
HOXA11P31270 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HOXA11P31270 AC005034.1-201ENST00000426657 489 ntBASIC17.52■□□□□ 0.4
HOXA11P31270 GAPDHP21-201ENST00000450301 1010 ntBASIC17.52■□□□□ 0.4
HOXA11P31270 AL589987.1-201ENST00000453380 819 ntBASIC17.52■□□□□ 0.4
HOXA11P31270 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC17.52■□□□□ 0.4
HOXA11P31270 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HOXA11P31270 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.52■□□□□ 0.4
HOXA11P31270 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.52■□□□□ 0.4
HOXA11P31270 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.52■□□□□ 0.4
HOXA11P31270 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.52■□□□□ 0.4
HOXA11P31270 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.52■□□□□ 0.4
HOXA11P31270 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.52■□□□□ 0.4
HOXA11P31270 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.52■□□□□ 0.4
HOXA11P31270 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.52■□□□□ 0.4
HOXA11P31270 AL035252.4-201ENST00000624174 288 ntBASIC17.52■□□□□ 0.4
HOXA11P31270 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
HOXA11P31270 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.52■□□□□ 0.4
HOXA11P31270 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.52■□□□□ 0.4
HOXA11P31270 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
HOXA11P31270 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
HOXA11P31270 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HOXA11P31270 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.52■□□□□ 0.39
HOXA11P31270 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.52■□□□□ 0.39
HOXA11P31270 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HOXA11P31270 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.51■□□□□ 0.39
HOXA11P31270 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
HOXA11P31270 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HOXA11P31270 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HOXA11P31270 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.51■□□□□ 0.39
HOXA11P31270 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXA11P31270 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
HOXA11P31270 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXA11P31270 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HOXA11P31270 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXA11P31270 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
HOXA11P31270 DFFBP1-201ENST00000433250 979 ntBASIC17.51■□□□□ 0.39
HOXA11P31270 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.51■□□□□ 0.39
HOXA11P31270 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
HOXA11P31270 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.51■□□□□ 0.39
HOXA11P31270 BNIP3P1-202ENST00000550043 1585 ntBASIC17.51■□□□□ 0.39
HOXA11P31270 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.51■□□□□ 0.39
HOXA11P31270 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HOXA11P31270 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.51■□□□□ 0.39
HOXA11P31270 AC027307.3-201ENST00000594262 1100 ntBASIC17.51■□□□□ 0.39
HOXA11P31270 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HOXA11P31270 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXA11P31270 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.51■□□□□ 0.39
HOXA11P31270 5S_rRNA.22-201ENST00000614916 106 ntBASIC17.51■□□□□ 0.39
HOXA11P31270 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.51■□□□□ 0.39
HOXA11P31270 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
HOXA11P31270 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
HOXA11P31270 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
HOXA11P31270 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXA11P31270 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
HOXA11P31270 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HOXA11P31270 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
HOXA11P31270 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HOXA11P31270 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HOXA11P31270 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms