Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 RERG-209ENST00000546331 1383 ntTSL 2 BASIC20■□□□□ 0.79
TM4SF1P30408 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC20■□□□□ 0.79
TM4SF1P30408 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC20■□□□□ 0.79
TM4SF1P30408 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TM4SF1P30408 YBX1P6-201ENST00000442962 1002 ntBASIC20■□□□□ 0.79
TM4SF1P30408 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC20■□□□□ 0.79
TM4SF1P30408 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
TM4SF1P30408 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC20■□□□□ 0.79
TM4SF1P30408 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC20■□□□□ 0.79
TM4SF1P30408 AC079316.1-201ENST00000548397 411 ntBASIC20■□□□□ 0.79
TM4SF1P30408 AC009486.1-201ENST00000569860 813 ntBASIC20■□□□□ 0.79
TM4SF1P30408 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC20■□□□□ 0.79
TM4SF1P30408 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC20■□□□□ 0.79
TM4SF1P30408 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC20■□□□□ 0.79
TM4SF1P30408 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
TM4SF1P30408 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC20■□□□□ 0.79
TM4SF1P30408 HADH-212ENST00000638621 741 ntTSL 5 BASIC20■□□□□ 0.79
TM4SF1P30408 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TM4SF1P30408 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TM4SF1P30408 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
TM4SF1P30408 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
TM4SF1P30408 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20■□□□□ 0.79
TM4SF1P30408 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20■□□□□ 0.79
TM4SF1P30408 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TM4SF1P30408 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC20■□□□□ 0.79
TM4SF1P30408 AC134312.5-201ENST00000568031 1313 ntBASIC20■□□□□ 0.79
TM4SF1P30408 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC20■□□□□ 0.79
TM4SF1P30408 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.99■□□□□ 0.79
TM4SF1P30408 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TM4SF1P30408 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TM4SF1P30408 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TM4SF1P30408 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TM4SF1P30408 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TM4SF1P30408 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TM4SF1P30408 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TM4SF1P30408 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TM4SF1P30408 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC19.99■□□□□ 0.79
TM4SF1P30408 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC19.99■□□□□ 0.79
TM4SF1P30408 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC19.99■□□□□ 0.79
TM4SF1P30408 DERL2-202ENST00000570848 657 ntTSL 5 BASIC19.99■□□□□ 0.79
TM4SF1P30408 AL049840.4-201ENST00000602422 811 ntBASIC19.99■□□□□ 0.79
TM4SF1P30408 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC19.99■□□□□ 0.79
TM4SF1P30408 AC009542.2-202ENST00000619004 1067 ntBASIC19.99■□□□□ 0.79
TM4SF1P30408 AC005252.2-201ENST00000624630 1141 ntBASIC19.99■□□□□ 0.79
TM4SF1P30408 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TM4SF1P30408 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TM4SF1P30408 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.99■□□□□ 0.79
TM4SF1P30408 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
TM4SF1P30408 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TM4SF1P30408 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
TM4SF1P30408 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TM4SF1P30408 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TM4SF1P30408 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TM4SF1P30408 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.99■□□□□ 0.79
TM4SF1P30408 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TM4SF1P30408 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TM4SF1P30408 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
TM4SF1P30408 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
TM4SF1P30408 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.98■□□□□ 0.79
TM4SF1P30408 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
TM4SF1P30408 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
TM4SF1P30408 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.98■□□□□ 0.79
TM4SF1P30408 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC19.98■□□□□ 0.79
TM4SF1P30408 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TM4SF1P30408 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TM4SF1P30408 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC19.98■□□□□ 0.79
TM4SF1P30408 C1QBPP1-201ENST00000400117 770 ntBASIC19.98■□□□□ 0.79
TM4SF1P30408 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TM4SF1P30408 RPL13AP25-201ENST00000484130 612 ntBASIC19.98■□□□□ 0.79
TM4SF1P30408 AC106760.1-201ENST00000508690 800 ntBASIC19.98■□□□□ 0.79
TM4SF1P30408 AC243562.2-201ENST00000561247 970 ntBASIC19.98■□□□□ 0.79
TM4SF1P30408 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC19.98■□□□□ 0.79
TM4SF1P30408 RN7SL560P-201ENST00000577943 264 ntBASIC19.98■□□□□ 0.79
TM4SF1P30408 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TM4SF1P30408 AC008687.7-202ENST00000637404 953 ntBASIC19.98■□□□□ 0.79
TM4SF1P30408 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.98■□□□□ 0.79
TM4SF1P30408 BNIP3P1-202ENST00000550043 1585 ntBASIC19.98■□□□□ 0.79
TM4SF1P30408 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TM4SF1P30408 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TM4SF1P30408 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.98■□□□□ 0.79
TM4SF1P30408 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TM4SF1P30408 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TM4SF1P30408 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC19.98■□□□□ 0.79
TM4SF1P30408 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TM4SF1P30408 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.98■□□□□ 0.79
TM4SF1P30408 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.98■□□□□ 0.79
TM4SF1P30408 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TM4SF1P30408 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
TM4SF1P30408 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TM4SF1P30408 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC19.97■□□□□ 0.79
TM4SF1P30408 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC19.97■□□□□ 0.79
TM4SF1P30408 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC19.97■□□□□ 0.79
TM4SF1P30408 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
TM4SF1P30408 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC19.97■□□□□ 0.79
TM4SF1P30408 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC19.97■□□□□ 0.79
TM4SF1P30408 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
TM4SF1P30408 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TM4SF1P30408 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
TM4SF1P30408 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC19.97■□□□□ 0.79
TM4SF1P30408 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms