Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.96■□□□□ 0.15
EPHA3P29320 ATP5G2P1-201ENST00000433580 426 ntBASIC15.96■□□□□ 0.15
EPHA3P29320 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.96■□□□□ 0.15
EPHA3P29320 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.96■□□□□ 0.15
EPHA3P29320 SART3-203ENST00000546611 1184 ntBASIC15.96■□□□□ 0.15
EPHA3P29320 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.96■□□□□ 0.15
EPHA3P29320 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.96■□□□□ 0.15
EPHA3P29320 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.96■□□□□ 0.15
EPHA3P29320 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
EPHA3P29320 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
EPHA3P29320 MTDHP4-201ENST00000600287 670 ntBASIC15.96■□□□□ 0.15
EPHA3P29320 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
EPHA3P29320 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
EPHA3P29320 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
EPHA3P29320 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
EPHA3P29320 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
EPHA3P29320 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.96■□□□□ 0.15
EPHA3P29320 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
EPHA3P29320 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
EPHA3P29320 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
EPHA3P29320 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
EPHA3P29320 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
EPHA3P29320 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.96■□□□□ 0.14
EPHA3P29320 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.14
EPHA3P29320 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
EPHA3P29320 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.95■□□□□ 0.14
EPHA3P29320 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.95■□□□□ 0.14
EPHA3P29320 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
EPHA3P29320 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
EPHA3P29320 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
EPHA3P29320 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
EPHA3P29320 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
EPHA3P29320 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.95■□□□□ 0.14
EPHA3P29320 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.95■□□□□ 0.14
EPHA3P29320 AC099063.4-201ENST00000641099 1602 ntBASIC15.95■□□□□ 0.14
EPHA3P29320 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.95■□□□□ 0.14
EPHA3P29320 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
EPHA3P29320 SSR4P1-203ENST00000599569 2260 ntBASIC15.95■□□□□ 0.14
EPHA3P29320 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.95■□□□□ 0.14
EPHA3P29320 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.95■□□□□ 0.14
EPHA3P29320 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.95■□□□□ 0.14
EPHA3P29320 ELK2BP-201ENST00000415014 1224 ntBASIC15.95■□□□□ 0.14
EPHA3P29320 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
EPHA3P29320 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.95■□□□□ 0.14
EPHA3P29320 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.95■□□□□ 0.14
EPHA3P29320 FOSL1P1-201ENST00000511041 816 ntBASIC15.95■□□□□ 0.14
EPHA3P29320 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.95■□□□□ 0.14
EPHA3P29320 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
EPHA3P29320 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.95■□□□□ 0.14
EPHA3P29320 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.95■□□□□ 0.14
EPHA3P29320 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.95■□□□□ 0.14
EPHA3P29320 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.95■□□□□ 0.14
EPHA3P29320 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
EPHA3P29320 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
EPHA3P29320 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.95■□□□□ 0.14
EPHA3P29320 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
EPHA3P29320 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
EPHA3P29320 AC136621.1-201ENST00000624017 2304 ntBASIC15.95■□□□□ 0.14
EPHA3P29320 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
EPHA3P29320 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
EPHA3P29320 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
EPHA3P29320 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.95■□□□□ 0.14
EPHA3P29320 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
EPHA3P29320 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.95■□□□□ 0.14
EPHA3P29320 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
EPHA3P29320 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.94■□□□□ 0.14
EPHA3P29320 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
EPHA3P29320 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
EPHA3P29320 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.94■□□□□ 0.14
EPHA3P29320 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.94■□□□□ 0.14
EPHA3P29320 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
EPHA3P29320 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
EPHA3P29320 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
EPHA3P29320 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.94■□□□□ 0.14
EPHA3P29320 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
EPHA3P29320 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.94■□□□□ 0.14
EPHA3P29320 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
EPHA3P29320 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
EPHA3P29320 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
EPHA3P29320 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
EPHA3P29320 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
EPHA3P29320 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
EPHA3P29320 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
EPHA3P29320 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
EPHA3P29320 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.94■□□□□ 0.14
EPHA3P29320 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.94■□□□□ 0.14
EPHA3P29320 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.94■□□□□ 0.14
EPHA3P29320 AC005412.3-201ENST00000580309 715 ntBASIC15.94■□□□□ 0.14
EPHA3P29320 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.94■□□□□ 0.14
EPHA3P29320 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.94■□□□□ 0.14
EPHA3P29320 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.94■□□□□ 0.14
EPHA3P29320 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
EPHA3P29320 AL805961.1-202ENST00000641562 540 ntBASIC15.94■□□□□ 0.14
EPHA3P29320 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.94■□□□□ 0.14
EPHA3P29320 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
EPHA3P29320 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
EPHA3P29320 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
EPHA3P29320 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
EPHA3P29320 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
EPHA3P29320 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms