Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RXRBP28702 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC20.96■□□□□ 0.95
RXRBP28702 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RXRBP28702 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RXRBP28702 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RXRBP28702 AL354989.2-201ENST00000435838 1540 ntBASIC20.96■□□□□ 0.95
RXRBP28702 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RXRBP28702 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC20.96■□□□□ 0.95
RXRBP28702 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RXRBP28702 NDUFAB1P1-201ENST00000404262 460 ntBASIC20.96■□□□□ 0.95
RXRBP28702 TISP43-201ENST00000409793 538 ntTSL 4 BASIC20.96■□□□□ 0.95
RXRBP28702 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC20.96■□□□□ 0.95
RXRBP28702 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC20.96■□□□□ 0.95
RXRBP28702 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC20.96■□□□□ 0.95
RXRBP28702 AC011742.3-201ENST00000439053 820 ntBASIC20.96■□□□□ 0.95
RXRBP28702 OARD1-204ENST00000464633 717 ntTSL 2 BASIC20.96■□□□□ 0.95
RXRBP28702 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC20.96■□□□□ 0.95
RXRBP28702 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
RXRBP28702 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RXRBP28702 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC20.96■□□□□ 0.95
RXRBP28702 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RXRBP28702 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RXRBP28702 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC20.96■□□□□ 0.95
RXRBP28702 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
RXRBP28702 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RXRBP28702 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RXRBP28702 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC20.95■□□□□ 0.94
RXRBP28702 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RXRBP28702 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RXRBP28702 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC20.95■□□□□ 0.94
RXRBP28702 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RXRBP28702 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC20.95■□□□□ 0.94
RXRBP28702 AL157792.1-201ENST00000488281 530 ntBASIC20.95■□□□□ 0.94
RXRBP28702 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC20.95■□□□□ 0.94
RXRBP28702 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC20.95■□□□□ 0.94
RXRBP28702 GMFG-209ENST00000600322 622 ntTSL 5 BASIC20.95■□□□□ 0.94
RXRBP28702 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC20.95■□□□□ 0.94
RXRBP28702 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RXRBP28702 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RXRBP28702 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RXRBP28702 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RXRBP28702 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RXRBP28702 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RXRBP28702 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RXRBP28702 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RXRBP28702 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RXRBP28702 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RXRBP28702 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RXRBP28702 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RXRBP28702 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RXRBP28702 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RXRBP28702 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC20.94■□□□□ 0.94
RXRBP28702 USP40-206ENST00000443711 628 ntTSL 2 BASIC20.94■□□□□ 0.94
RXRBP28702 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RXRBP28702 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
RXRBP28702 AC005740.2-201ENST00000511085 419 ntBASIC20.94■□□□□ 0.94
RXRBP28702 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
RXRBP28702 AP003392.6-201ENST00000607709 325 ntBASIC20.94■□□□□ 0.94
RXRBP28702 AL353770.1-201ENST00000614915 403 ntBASIC20.94■□□□□ 0.94
RXRBP28702 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC20.94■□□□□ 0.94
RXRBP28702 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RXRBP28702 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RXRBP28702 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RXRBP28702 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RXRBP28702 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RXRBP28702 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.94■□□□□ 0.94
RXRBP28702 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.94■□□□□ 0.94
RXRBP28702 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RXRBP28702 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RXRBP28702 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC20.94■□□□□ 0.94
RXRBP28702 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RXRBP28702 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
RXRBP28702 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.93■□□□□ 0.94
RXRBP28702 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC20.93■□□□□ 0.94
RXRBP28702 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RXRBP28702 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RXRBP28702 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.93■□□□□ 0.94
RXRBP28702 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
RXRBP28702 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RXRBP28702 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RXRBP28702 DNAJB1P1-201ENST00000429417 1024 ntBASIC20.93■□□□□ 0.94
RXRBP28702 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC20.93■□□□□ 0.94
RXRBP28702 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC20.93■□□□□ 0.94
RXRBP28702 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
RXRBP28702 RNF41-210ENST00000552244 716 ntTSL 3 BASIC20.93■□□□□ 0.94
RXRBP28702 PPY2P-201ENST00000582808 702 ntBASIC20.93■□□□□ 0.94
RXRBP28702 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
RXRBP28702 MIR4321-201ENST00000592276 80 ntBASIC20.93■□□□□ 0.94
RXRBP28702 UBL5-208ENST00000593087 320 ntTSL 3 BASIC20.93■□□□□ 0.94
RXRBP28702 AC092171.5-201ENST00000608012 942 ntBASIC20.93■□□□□ 0.94
RXRBP28702 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC20.93■□□□□ 0.94
RXRBP28702 AL805961.1-201ENST00000642026 753 ntBASIC20.93■□□□□ 0.94
RXRBP28702 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RXRBP28702 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RXRBP28702 AC016396.2-201ENST00000562575 1417 ntBASIC20.93■□□□□ 0.94
RXRBP28702 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.93■□□□□ 0.94
RXRBP28702 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RXRBP28702 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RXRBP28702 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC20.93■□□□□ 0.94
RXRBP28702 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms