Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.16■□□□□ 0.34
MMP8P22894 SPDYE10P-202ENST00000612005 668 ntBASIC17.16■□□□□ 0.34
MMP8P22894 SPDYE8P-202ENST00000612377 668 ntBASIC17.16■□□□□ 0.34
MMP8P22894 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.16■□□□□ 0.34
MMP8P22894 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MMP8P22894 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.16■□□□□ 0.34
MMP8P22894 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.16■□□□□ 0.34
MMP8P22894 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MMP8P22894 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
MMP8P22894 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
MMP8P22894 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.15■□□□□ 0.34
MMP8P22894 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
MMP8P22894 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MMP8P22894 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MMP8P22894 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
MMP8P22894 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MMP8P22894 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MMP8P22894 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.15■□□□□ 0.34
MMP8P22894 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.15■□□□□ 0.34
MMP8P22894 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MMP8P22894 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MMP8P22894 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.15■□□□□ 0.34
MMP8P22894 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.15■□□□□ 0.34
MMP8P22894 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.15■□□□□ 0.34
MMP8P22894 AP000842.3-202ENST00000569238 1080 ntBASIC17.15■□□□□ 0.34
MMP8P22894 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
MMP8P22894 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.15■□□□□ 0.34
MMP8P22894 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.15■□□□□ 0.34
MMP8P22894 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
MMP8P22894 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.15■□□□□ 0.34
MMP8P22894 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
MMP8P22894 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
MMP8P22894 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
MMP8P22894 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MMP8P22894 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MMP8P22894 ELL2P1-201ENST00000413990 1906 ntBASIC17.15■□□□□ 0.34
MMP8P22894 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MMP8P22894 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
MMP8P22894 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.15■□□□□ 0.34
MMP8P22894 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MMP8P22894 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
MMP8P22894 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.15■□□□□ 0.34
MMP8P22894 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
MMP8P22894 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.15■□□□□ 0.34
MMP8P22894 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MMP8P22894 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.14■□□□□ 0.34
MMP8P22894 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.14■□□□□ 0.34
MMP8P22894 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MMP8P22894 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MMP8P22894 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MMP8P22894 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MMP8P22894 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MMP8P22894 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MMP8P22894 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.14■□□□□ 0.33
MMP8P22894 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
MMP8P22894 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MMP8P22894 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MMP8P22894 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.14■□□□□ 0.33
MMP8P22894 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MMP8P22894 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.14■□□□□ 0.33
MMP8P22894 DNAJB3-201ENST00000446806 729 ntBASIC17.14■□□□□ 0.33
MMP8P22894 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
MMP8P22894 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC17.14■□□□□ 0.33
MMP8P22894 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.14■□□□□ 0.33
MMP8P22894 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.14■□□□□ 0.33
MMP8P22894 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.14■□□□□ 0.33
MMP8P22894 KRT8P23-201ENST00000560090 1207 ntBASIC17.14■□□□□ 0.33
MMP8P22894 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.14■□□□□ 0.33
MMP8P22894 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.14■□□□□ 0.33
MMP8P22894 AC005829.1-201ENST00000570002 483 ntBASIC17.14■□□□□ 0.33
MMP8P22894 AC061975.2-201ENST00000581722 295 ntBASIC17.14■□□□□ 0.33
MMP8P22894 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.14■□□□□ 0.33
MMP8P22894 AC084121.4-201ENST00000641598 221 ntBASIC17.14■□□□□ 0.33
MMP8P22894 AF228730.8-201ENST00000642140 221 ntBASIC17.14■□□□□ 0.33
MMP8P22894 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MMP8P22894 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.14■□□□□ 0.33
MMP8P22894 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MMP8P22894 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MMP8P22894 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MMP8P22894 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
MMP8P22894 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
MMP8P22894 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
MMP8P22894 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MMP8P22894 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
MMP8P22894 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.13■□□□□ 0.33
MMP8P22894 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MMP8P22894 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.13■□□□□ 0.33
MMP8P22894 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MMP8P22894 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MMP8P22894 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
MMP8P22894 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.13■□□□□ 0.33
MMP8P22894 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
MMP8P22894 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MMP8P22894 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MMP8P22894 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.13■□□□□ 0.33
MMP8P22894 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.13■□□□□ 0.33
MMP8P22894 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
MMP8P22894 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.13■□□□□ 0.33
MMP8P22894 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.13■□□□□ 0.33
MMP8P22894 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms