Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFX1P22670 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.81■□□□□ 0.44
RFX1P22670 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.81■□□□□ 0.44
RFX1P22670 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFX1P22670 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFX1P22670 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
RFX1P22670 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RFX1P22670 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
RFX1P22670 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.81■□□□□ 0.44
RFX1P22670 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RFX1P22670 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.8■□□□□ 0.44
RFX1P22670 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFX1P22670 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.8■□□□□ 0.44
RFX1P22670 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFX1P22670 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.8■□□□□ 0.44
RFX1P22670 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFX1P22670 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.8■□□□□ 0.44
RFX1P22670 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFX1P22670 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFX1P22670 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
RFX1P22670 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.8■□□□□ 0.44
RFX1P22670 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.8■□□□□ 0.44
RFX1P22670 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.8■□□□□ 0.44
RFX1P22670 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.8■□□□□ 0.44
RFX1P22670 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.8■□□□□ 0.44
RFX1P22670 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RFX1P22670 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.8■□□□□ 0.44
RFX1P22670 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.8■□□□□ 0.44
RFX1P22670 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.8■□□□□ 0.44
RFX1P22670 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.8■□□□□ 0.44
RFX1P22670 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.8■□□□□ 0.44
RFX1P22670 AC022145.2-201ENST00000598203 171 ntBASIC17.8■□□□□ 0.44
RFX1P22670 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RFX1P22670 AF228730.6-201ENST00000641497 218 ntBASIC17.8■□□□□ 0.44
RFX1P22670 AC084121.3-201ENST00000641716 218 ntBASIC17.8■□□□□ 0.44
RFX1P22670 AC105233.6-201ENST00000642093 218 ntBASIC17.8■□□□□ 0.44
RFX1P22670 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
RFX1P22670 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFX1P22670 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RFX1P22670 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RFX1P22670 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
RFX1P22670 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFX1P22670 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
RFX1P22670 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFX1P22670 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RFX1P22670 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFX1P22670 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
RFX1P22670 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RFX1P22670 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RFX1P22670 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RFX1P22670 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
RFX1P22670 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
RFX1P22670 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RFX1P22670 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFX1P22670 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.79■□□□□ 0.44
RFX1P22670 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFX1P22670 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.79■□□□□ 0.44
RFX1P22670 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RFX1P22670 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFX1P22670 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFX1P22670 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.79■□□□□ 0.44
RFX1P22670 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFX1P22670 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFX1P22670 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.79■□□□□ 0.44
RFX1P22670 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RFX1P22670 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RFX1P22670 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.79■□□□□ 0.44
RFX1P22670 BASP1P1-201ENST00000430708 665 ntBASIC17.79■□□□□ 0.44
RFX1P22670 AC005237.2-201ENST00000434368 219 ntBASIC17.79■□□□□ 0.44
RFX1P22670 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFX1P22670 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFX1P22670 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
RFX1P22670 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.79■□□□□ 0.44
RFX1P22670 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.79■□□□□ 0.44
RFX1P22670 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFX1P22670 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.79■□□□□ 0.44
RFX1P22670 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.79■□□□□ 0.44
RFX1P22670 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RFX1P22670 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFX1P22670 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.79■□□□□ 0.44
RFX1P22670 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFX1P22670 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.79■□□□□ 0.44
RFX1P22670 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFX1P22670 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFX1P22670 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFX1P22670 PCDH8P1-201ENST00000428983 2773 ntBASIC17.79■□□□□ 0.44
RFX1P22670 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFX1P22670 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFX1P22670 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFX1P22670 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
RFX1P22670 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.78■□□□□ 0.44
RFX1P22670 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFX1P22670 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.78■□□□□ 0.44
RFX1P22670 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFX1P22670 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
RFX1P22670 REXO1L8P-201ENST00000604378 1897 ntBASIC17.78■□□□□ 0.44
RFX1P22670 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.78■□□□□ 0.44
RFX1P22670 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
RFX1P22670 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RFX1P22670 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms