Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.2■□□□□ 0.66
TOP1P11387 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TOP1P11387 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC19.2■□□□□ 0.66
TOP1P11387 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC19.2■□□□□ 0.66
TOP1P11387 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.2■□□□□ 0.66
TOP1P11387 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.2■□□□□ 0.66
TOP1P11387 AC051619.7-201ENST00000568314 623 ntBASIC19.2■□□□□ 0.66
TOP1P11387 MIR6080-201ENST00000617359 66 ntBASIC19.2■□□□□ 0.66
TOP1P11387 AC093512.1-201ENST00000617969 520 ntBASIC19.2■□□□□ 0.66
TOP1P11387 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TOP1P11387 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC19.2■□□□□ 0.66
TOP1P11387 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TOP1P11387 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TOP1P11387 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TOP1P11387 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TOP1P11387 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TOP1P11387 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TOP1P11387 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TOP1P11387 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TOP1P11387 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TOP1P11387 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
TOP1P11387 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC19.19■□□□□ 0.66
TOP1P11387 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC19.19■□□□□ 0.66
TOP1P11387 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TOP1P11387 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC19.19■□□□□ 0.66
TOP1P11387 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TOP1P11387 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TOP1P11387 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TOP1P11387 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
TOP1P11387 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
TOP1P11387 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TOP1P11387 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC19.19■□□□□ 0.66
TOP1P11387 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC19.19■□□□□ 0.66
TOP1P11387 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC19.19■□□□□ 0.66
TOP1P11387 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC19.19■□□□□ 0.66
TOP1P11387 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC19.19■□□□□ 0.66
TOP1P11387 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC19.19■□□□□ 0.66
TOP1P11387 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TOP1P11387 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
TOP1P11387 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TOP1P11387 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC19.19■□□□□ 0.66
TOP1P11387 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TOP1P11387 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC19.19■□□□□ 0.66
TOP1P11387 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TOP1P11387 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TOP1P11387 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
TOP1P11387 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TOP1P11387 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TOP1P11387 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TOP1P11387 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TOP1P11387 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TOP1P11387 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC19.18■□□□□ 0.66
TOP1P11387 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TOP1P11387 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC19.18■□□□□ 0.66
TOP1P11387 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TOP1P11387 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TOP1P11387 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.18■□□□□ 0.66
TOP1P11387 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC19.18■□□□□ 0.66
TOP1P11387 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC19.18■□□□□ 0.66
TOP1P11387 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19.18■□□□□ 0.66
TOP1P11387 AC018529.1-201ENST00000613063 361 ntBASIC19.18■□□□□ 0.66
TOP1P11387 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TOP1P11387 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TOP1P11387 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TOP1P11387 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC19.18■□□□□ 0.66
TOP1P11387 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
TOP1P11387 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TOP1P11387 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TOP1P11387 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TOP1P11387 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
TOP1P11387 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TOP1P11387 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TOP1P11387 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC19.17■□□□□ 0.66
TOP1P11387 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC19.17■□□□□ 0.66
TOP1P11387 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC19.17■□□□□ 0.66
TOP1P11387 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC19.17■□□□□ 0.66
TOP1P11387 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TOP1P11387 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TOP1P11387 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TOP1P11387 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC19.17■□□□□ 0.66
TOP1P11387 AL589702.1-201ENST00000641229 1509 ntBASIC19.17■□□□□ 0.66
TOP1P11387 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TOP1P11387 KLF2P3-201ENST00000451977 1087 ntBASIC19.17■□□□□ 0.66
TOP1P11387 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
TOP1P11387 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC19.17■□□□□ 0.66
TOP1P11387 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TOP1P11387 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TOP1P11387 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC19.17■□□□□ 0.66
TOP1P11387 MIR4453-201ENST00000584019 89 ntBASIC19.17■□□□□ 0.66
TOP1P11387 WT1-209ENST00000530998 2421 ntTSL 2 BASIC19.17■□□□□ 0.66
TOP1P11387 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC19.17■□□□□ 0.66
TOP1P11387 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.17■□□□□ 0.66
TOP1P11387 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TOP1P11387 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TOP1P11387 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TOP1P11387 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TOP1P11387 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.17■□□□□ 0.66
TOP1P11387 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC19.17■□□□□ 0.66
TOP1P11387 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
TOP1P11387 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms