Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CSB-PGBD3P0DP91 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CSB-PGBD3P0DP91 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC21.48■■□□□ 1.03
CSB-PGBD3P0DP91 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CSB-PGBD3P0DP91 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC21.48■■□□□ 1.03
CSB-PGBD3P0DP91 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CSB-PGBD3P0DP91 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CSB-PGBD3P0DP91 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CSB-PGBD3P0DP91 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CSB-PGBD3P0DP91 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CSB-PGBD3P0DP91 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CSB-PGBD3P0DP91 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CSB-PGBD3P0DP91 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CSB-PGBD3P0DP91 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC21.48■■□□□ 1.03
CSB-PGBD3P0DP91 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC21.48■■□□□ 1.03
CSB-PGBD3P0DP91 RN7SL399P-201ENST00000471648 279 ntBASIC21.48■■□□□ 1.03
CSB-PGBD3P0DP91 FXR1-221ENST00000491674 365 ntTSL 2 BASIC21.48■■□□□ 1.03
CSB-PGBD3P0DP91 USB1-203ENST00000539737 1212 ntTSL 2 BASIC21.48■■□□□ 1.03
CSB-PGBD3P0DP91 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC21.48■■□□□ 1.03
CSB-PGBD3P0DP91 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC21.48■■□□□ 1.03
CSB-PGBD3P0DP91 AC233724.13-201ENST00000598383 410 ntBASIC21.48■■□□□ 1.03
CSB-PGBD3P0DP91 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC21.48■■□□□ 1.03
CSB-PGBD3P0DP91 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
CSB-PGBD3P0DP91 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC21.48■■□□□ 1.03
CSB-PGBD3P0DP91 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CSB-PGBD3P0DP91 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CSB-PGBD3P0DP91 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CSB-PGBD3P0DP91 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC21.48■■□□□ 1.03
CSB-PGBD3P0DP91 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CSB-PGBD3P0DP91 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CSB-PGBD3P0DP91 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
CSB-PGBD3P0DP91 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC21.48■■□□□ 1.03
CSB-PGBD3P0DP91 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC21.48■■□□□ 1.03
CSB-PGBD3P0DP91 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC21.48■■□□□ 1.03
CSB-PGBD3P0DP91 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.48■■□□□ 1.03
CSB-PGBD3P0DP91 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CSB-PGBD3P0DP91 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CSB-PGBD3P0DP91 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CSB-PGBD3P0DP91 AC007613.1-201ENST00000572811 2597 ntBASIC21.47■■□□□ 1.03
CSB-PGBD3P0DP91 U82695.1-201ENST00000635752 1889 ntBASIC21.47■■□□□ 1.03
CSB-PGBD3P0DP91 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC21.47■■□□□ 1.03
CSB-PGBD3P0DP91 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
CSB-PGBD3P0DP91 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC21.47■■□□□ 1.03
CSB-PGBD3P0DP91 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC21.47■■□□□ 1.03
CSB-PGBD3P0DP91 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC21.47■■□□□ 1.03
CSB-PGBD3P0DP91 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
CSB-PGBD3P0DP91 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
CSB-PGBD3P0DP91 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CSB-PGBD3P0DP91 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
CSB-PGBD3P0DP91 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
CSB-PGBD3P0DP91 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
CSB-PGBD3P0DP91 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CSB-PGBD3P0DP91 CTBP2P5-201ENST00000454986 1264 ntBASIC21.47■■□□□ 1.03
CSB-PGBD3P0DP91 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
CSB-PGBD3P0DP91 LINC01115-203ENST00000606068 577 ntBASIC21.47■■□□□ 1.03
CSB-PGBD3P0DP91 SNX12-206ENST00000622259 661 ntTSL 5 BASIC21.47■■□□□ 1.03
CSB-PGBD3P0DP91 RPSAP52-203ENST00000622976 1023 ntBASIC21.47■■□□□ 1.03
CSB-PGBD3P0DP91 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC21.47■■□□□ 1.03
CSB-PGBD3P0DP91 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CSB-PGBD3P0DP91 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CSB-PGBD3P0DP91 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CSB-PGBD3P0DP91 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CSB-PGBD3P0DP91 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CSB-PGBD3P0DP91 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
CSB-PGBD3P0DP91 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CSB-PGBD3P0DP91 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CSB-PGBD3P0DP91 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CSB-PGBD3P0DP91 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CSB-PGBD3P0DP91 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CSB-PGBD3P0DP91 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CSB-PGBD3P0DP91 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CSB-PGBD3P0DP91 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
CSB-PGBD3P0DP91 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CSB-PGBD3P0DP91 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CSB-PGBD3P0DP91 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CSB-PGBD3P0DP91 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CSB-PGBD3P0DP91 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CSB-PGBD3P0DP91 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC21.46■■□□□ 1.03
CSB-PGBD3P0DP91 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CSB-PGBD3P0DP91 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CSB-PGBD3P0DP91 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CSB-PGBD3P0DP91 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CSB-PGBD3P0DP91 STX1A-203ENST00000395155 783 ntTSL 2 BASIC21.46■■□□□ 1.03
CSB-PGBD3P0DP91 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CSB-PGBD3P0DP91 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CSB-PGBD3P0DP91 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CSB-PGBD3P0DP91 SLC25A47P1-201ENST00000531577 414 ntBASIC21.46■■□□□ 1.03
CSB-PGBD3P0DP91 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC21.46■■□□□ 1.03
CSB-PGBD3P0DP91 AC036164.1-201ENST00000570544 333 ntBASIC21.46■■□□□ 1.03
CSB-PGBD3P0DP91 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CSB-PGBD3P0DP91 MIR4321-201ENST00000592276 80 ntBASIC21.46■■□□□ 1.03
CSB-PGBD3P0DP91 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC21.46■■□□□ 1.03
CSB-PGBD3P0DP91 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CSB-PGBD3P0DP91 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC21.46■■□□□ 1.03
CSB-PGBD3P0DP91 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC21.46■■□□□ 1.03
CSB-PGBD3P0DP91 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CSB-PGBD3P0DP91 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CSB-PGBD3P0DP91 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CSB-PGBD3P0DP91 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC21.46■■□□□ 1.03
CSB-PGBD3P0DP91 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms