Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MYCNP04198 AC012569.1-201ENST00000591191 1524 ntBASIC19.05■□□□□ 0.64
MYCNP04198 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.05■□□□□ 0.64
MYCNP04198 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MYCNP04198 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
MYCNP04198 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.04■□□□□ 0.64
MYCNP04198 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
MYCNP04198 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.04■□□□□ 0.64
MYCNP04198 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MYCNP04198 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
MYCNP04198 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.04■□□□□ 0.64
MYCNP04198 LMO7DN-201ENST00000318245 1167 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
MYCNP04198 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MYCNP04198 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
MYCNP04198 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC19.04■□□□□ 0.64
MYCNP04198 PYM1-202ENST00000398213 1073 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
MYCNP04198 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC19.04■□□□□ 0.64
MYCNP04198 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
MYCNP04198 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
MYCNP04198 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC19.04■□□□□ 0.64
MYCNP04198 BACE2-IT1-201ENST00000433378 382 ntTSL 5 BASIC19.04■□□□□ 0.64
MYCNP04198 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC19.04■□□□□ 0.64
MYCNP04198 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC19.04■□□□□ 0.64
MYCNP04198 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC19.04■□□□□ 0.64
MYCNP04198 CCDC74BP1-201ENST00000508880 1123 ntBASIC19.04■□□□□ 0.64
MYCNP04198 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC19.04■□□□□ 0.64
MYCNP04198 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
MYCNP04198 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.04■□□□□ 0.64
MYCNP04198 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC19.04■□□□□ 0.64
MYCNP04198 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.04■□□□□ 0.64
MYCNP04198 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC19.04■□□□□ 0.64
MYCNP04198 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC19.04■□□□□ 0.64
MYCNP04198 AC025811.1-201ENST00000604312 472 ntBASIC19.04■□□□□ 0.64
MYCNP04198 AL137796.1-201ENST00000608190 577 ntBASIC19.04■□□□□ 0.64
MYCNP04198 AC027449.1-201ENST00000608890 407 ntBASIC19.04■□□□□ 0.64
MYCNP04198 AL050303.3-201ENST00000613704 284 ntBASIC19.04■□□□□ 0.64
MYCNP04198 GNG2-216ENST00000615906 1294 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
MYCNP04198 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.04■□□□□ 0.64
MYCNP04198 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
MYCNP04198 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MYCNP04198 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
MYCNP04198 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
MYCNP04198 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
MYCNP04198 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
MYCNP04198 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.04■□□□□ 0.64
MYCNP04198 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.04■□□□□ 0.64
MYCNP04198 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MYCNP04198 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.03■□□□□ 0.64
MYCNP04198 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
MYCNP04198 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MYCNP04198 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC19.03■□□□□ 0.64
MYCNP04198 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MYCNP04198 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MYCNP04198 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.03■□□□□ 0.64
MYCNP04198 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MYCNP04198 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MYCNP04198 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MYCNP04198 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MYCNP04198 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MYCNP04198 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC19.03■□□□□ 0.64
MYCNP04198 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MYCNP04198 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MYCNP04198 SETD4-203ENST00000399205 1208 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MYCNP04198 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MYCNP04198 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC19.03■□□□□ 0.64
MYCNP04198 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC19.03■□□□□ 0.64
MYCNP04198 TPTE2P3-201ENST00000441562 1189 ntBASIC19.03■□□□□ 0.64
MYCNP04198 SPDYE14P-201ENST00000442619 822 ntBASIC19.03■□□□□ 0.64
MYCNP04198 RBMS3-207ENST00000445033 1120 ntTSL 2 BASIC19.03■□□□□ 0.64
MYCNP04198 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MYCNP04198 SCARNA1-201ENST00000517138 166 ntBASIC19.03■□□□□ 0.64
MYCNP04198 AP005018.1-201ENST00000525475 301 ntBASIC19.03■□□□□ 0.64
MYCNP04198 NFRKB-205ENST00000526940 539 ntTSL 2 BASIC19.03■□□□□ 0.64
MYCNP04198 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC19.03■□□□□ 0.64
MYCNP04198 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC19.03■□□□□ 0.64
MYCNP04198 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC19.03■□□□□ 0.64
MYCNP04198 COX11-202ENST00000571584 1108 ntTSL 2 BASIC19.03■□□□□ 0.64
MYCNP04198 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC19.03■□□□□ 0.64
MYCNP04198 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MYCNP04198 AL008721.1-201ENST00000609964 604 ntBASIC19.03■□□□□ 0.64
MYCNP04198 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
MYCNP04198 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.03■□□□□ 0.64
MYCNP04198 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MYCNP04198 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
MYCNP04198 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC19.03■□□□□ 0.64
MYCNP04198 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
MYCNP04198 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MYCNP04198 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
MYCNP04198 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
MYCNP04198 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MYCNP04198 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
MYCNP04198 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
MYCNP04198 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
MYCNP04198 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
MYCNP04198 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC19.02■□□□□ 0.64
MYCNP04198 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
MYCNP04198 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
MYCNP04198 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
MYCNP04198 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
MYCNP04198 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms