Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
VTNP04004 AGGF1P2-201ENST00000426656 2106 ntBASIC17.83■□□□□ 0.44
VTNP04004 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.83■□□□□ 0.44
VTNP04004 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VTNP04004 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.83■□□□□ 0.44
VTNP04004 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VTNP04004 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.82■□□□□ 0.44
VTNP04004 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VTNP04004 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.82■□□□□ 0.44
VTNP04004 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
VTNP04004 AC009053.2-201ENST00000563701 2365 ntBASIC17.82■□□□□ 0.44
VTNP04004 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
VTNP04004 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VTNP04004 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.82■□□□□ 0.44
VTNP04004 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
VTNP04004 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
VTNP04004 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VTNP04004 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
VTNP04004 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VTNP04004 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VTNP04004 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.82■□□□□ 0.44
VTNP04004 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.82■□□□□ 0.44
VTNP04004 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
VTNP04004 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VTNP04004 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VTNP04004 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.82■□□□□ 0.44
VTNP04004 SERBP1P3-201ENST00000459980 809 ntBASIC17.82■□□□□ 0.44
VTNP04004 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VTNP04004 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.82■□□□□ 0.44
VTNP04004 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.82■□□□□ 0.44
VTNP04004 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VTNP04004 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.82■□□□□ 0.44
VTNP04004 AC025048.6-201ENST00000634326 1161 ntBASIC17.82■□□□□ 0.44
VTNP04004 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
VTNP04004 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VTNP04004 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VTNP04004 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
VTNP04004 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
VTNP04004 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
VTNP04004 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VTNP04004 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC17.82■□□□□ 0.44
VTNP04004 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.82■□□□□ 0.44
VTNP04004 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VTNP04004 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VTNP04004 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
VTNP04004 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VTNP04004 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
VTNP04004 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VTNP04004 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
VTNP04004 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
VTNP04004 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VTNP04004 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VTNP04004 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VTNP04004 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VTNP04004 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.81■□□□□ 0.44
VTNP04004 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VTNP04004 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.81■□□□□ 0.44
VTNP04004 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.81■□□□□ 0.44
VTNP04004 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VTNP04004 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VTNP04004 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.81■□□□□ 0.44
VTNP04004 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.81■□□□□ 0.44
VTNP04004 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.81■□□□□ 0.44
VTNP04004 POU5F1P6-201ENST00000466990 990 ntBASIC17.81■□□□□ 0.44
VTNP04004 ZNF890P-202ENST00000530367 1156 ntBASIC17.81■□□□□ 0.44
VTNP04004 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
VTNP04004 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.81■□□□□ 0.44
VTNP04004 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VTNP04004 AL132655.2-201ENST00000596276 594 ntBASIC17.81■□□□□ 0.44
VTNP04004 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
VTNP04004 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
VTNP04004 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.81■□□□□ 0.44
VTNP04004 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VTNP04004 AC007541.1-201ENST00000570282 1469 ntBASIC17.81■□□□□ 0.44
VTNP04004 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VTNP04004 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VTNP04004 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.81■□□□□ 0.44
VTNP04004 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
VTNP04004 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
VTNP04004 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
VTNP04004 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VTNP04004 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VTNP04004 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.8■□□□□ 0.44
VTNP04004 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
VTNP04004 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.8■□□□□ 0.44
VTNP04004 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VTNP04004 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VTNP04004 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VTNP04004 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VTNP04004 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VTNP04004 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VTNP04004 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VTNP04004 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
VTNP04004 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
VTNP04004 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
VTNP04004 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.8■□□□□ 0.44
VTNP04004 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.8■□□□□ 0.44
VTNP04004 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
VTNP04004 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.8■□□□□ 0.44
VTNP04004 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms