Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 AL596442.2-201ENST00000610240 980 ntBASIC17.56■□□□□ 0.4
HLA-DRAP01903 AL691403.2-201ENST00000618460 490 ntBASIC17.56■□□□□ 0.4
HLA-DRAP01903 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.56■□□□□ 0.4
HLA-DRAP01903 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
HLA-DRAP01903 TNRC18P3-201ENST00000441896 2691 ntBASIC17.56■□□□□ 0.4
HLA-DRAP01903 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DRAP01903 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DRAP01903 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DRAP01903 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DRAP01903 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DRAP01903 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DRAP01903 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
HLA-DRAP01903 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DRAP01903 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DRAP01903 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DRAP01903 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.55■□□□□ 0.4
HLA-DRAP01903 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DRAP01903 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DRAP01903 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.55■□□□□ 0.4
HLA-DRAP01903 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.55■□□□□ 0.4
HLA-DRAP01903 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DRAP01903 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.55■□□□□ 0.4
HLA-DRAP01903 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DRAP01903 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.55■□□□□ 0.4
HLA-DRAP01903 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DRAP01903 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
HLA-DRAP01903 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DRAP01903 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DRAP01903 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.55■□□□□ 0.4
HLA-DRAP01903 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
HLA-DRAP01903 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DRAP01903 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DRAP01903 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.55■□□□□ 0.4
HLA-DRAP01903 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DRAP01903 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
HLA-DRAP01903 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DRAP01903 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DRAP01903 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.55■□□□□ 0.4
HLA-DRAP01903 DNAJB3-202ENST00000449667 1266 ntBASIC17.55■□□□□ 0.4
HLA-DRAP01903 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.55■□□□□ 0.4
HLA-DRAP01903 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.55■□□□□ 0.4
HLA-DRAP01903 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
HLA-DRAP01903 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.55■□□□□ 0.4
HLA-DRAP01903 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.55■□□□□ 0.4
HLA-DRAP01903 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DRAP01903 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.55■□□□□ 0.4
HLA-DRAP01903 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
HLA-DRAP01903 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DRAP01903 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DRAP01903 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DRAP01903 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DRAP01903 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DRAP01903 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DRAP01903 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
HLA-DRAP01903 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.55■□□□□ 0.4
HLA-DRAP01903 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DRAP01903 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.55■□□□□ 0.4
HLA-DRAP01903 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.55■□□□□ 0.4
HLA-DRAP01903 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.54■□□□□ 0.4
HLA-DRAP01903 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DRAP01903 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
HLA-DRAP01903 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.54■□□□□ 0.4
HLA-DRAP01903 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DRAP01903 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.54■□□□□ 0.4
HLA-DRAP01903 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
HLA-DRAP01903 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
HLA-DRAP01903 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DRAP01903 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DRAP01903 FAM220BP-201ENST00000377689 816 ntBASIC17.54■□□□□ 0.4
HLA-DRAP01903 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DRAP01903 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DRAP01903 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
HLA-DRAP01903 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DRAP01903 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DRAP01903 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.54■□□□□ 0.4
HLA-DRAP01903 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
HLA-DRAP01903 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.54■□□□□ 0.4
HLA-DRAP01903 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
HLA-DRAP01903 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.54■□□□□ 0.4
HLA-DRAP01903 MIR4321-201ENST00000592276 80 ntBASIC17.54■□□□□ 0.4
HLA-DRAP01903 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
HLA-DRAP01903 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.54■□□□□ 0.4
HLA-DRAP01903 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.54■□□□□ 0.4
HLA-DRAP01903 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DRAP01903 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
HLA-DRAP01903 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DRAP01903 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DRAP01903 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DRAP01903 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DRAP01903 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
HLA-DRAP01903 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DRAP01903 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-DRAP01903 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
HLA-DRAP01903 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DRAP01903 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.53■□□□□ 0.4
HLA-DRAP01903 AP3S2-216ENST00000617003 1561 ntBASIC17.53■□□□□ 0.4
HLA-DRAP01903 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DRAP01903 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DRAP01903 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-DRAP01903 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms