Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
MT-CO1P00395 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.78■□□□□ 0.28
MT-CO1P00395 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MT-CO1P00395 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MT-CO1P00395 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.78■□□□□ 0.28
MT-CO1P00395 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MT-CO1P00395 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
MT-CO1P00395 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.78■□□□□ 0.28
MT-CO1P00395 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
MT-CO1P00395 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.78■□□□□ 0.28
MT-CO1P00395 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.78■□□□□ 0.28
MT-CO1P00395 RFPL4AP1-201ENST00000530883 850 ntBASIC16.78■□□□□ 0.28
MT-CO1P00395 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
MT-CO1P00395 AC026150.2-201ENST00000564693 1156 ntBASIC16.78■□□□□ 0.28
MT-CO1P00395 AC106028.4-201ENST00000614509 607 ntBASIC16.78■□□□□ 0.28
MT-CO1P00395 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.78■□□□□ 0.28
MT-CO1P00395 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MT-CO1P00395 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MT-CO1P00395 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
MT-CO1P00395 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MT-CO1P00395 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MT-CO1P00395 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MT-CO1P00395 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
MT-CO1P00395 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MT-CO1P00395 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
MT-CO1P00395 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MT-CO1P00395 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MT-CO1P00395 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.78■□□□□ 0.28
MT-CO1P00395 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
MT-CO1P00395 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.77■□□□□ 0.28
MT-CO1P00395 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MT-CO1P00395 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MT-CO1P00395 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
MT-CO1P00395 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
MT-CO1P00395 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
MT-CO1P00395 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.77■□□□□ 0.28
MT-CO1P00395 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
MT-CO1P00395 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.77■□□□□ 0.28
MT-CO1P00395 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.77■□□□□ 0.28
MT-CO1P00395 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.77■□□□□ 0.28
MT-CO1P00395 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MT-CO1P00395 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MT-CO1P00395 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
MT-CO1P00395 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MT-CO1P00395 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.77■□□□□ 0.28
MT-CO1P00395 SPDYE14P-201ENST00000442619 822 ntBASIC16.77■□□□□ 0.28
MT-CO1P00395 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.77■□□□□ 0.28
MT-CO1P00395 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.77■□□□□ 0.28
MT-CO1P00395 AC105233.2-201ENST00000523697 349 ntBASIC16.77■□□□□ 0.28
MT-CO1P00395 AF228730.5-201ENST00000530288 346 ntBASIC16.77■□□□□ 0.28
MT-CO1P00395 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.77■□□□□ 0.28
MT-CO1P00395 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
MT-CO1P00395 AC025678.2-201ENST00000562061 970 ntBASIC16.77■□□□□ 0.28
MT-CO1P00395 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.77■□□□□ 0.28
MT-CO1P00395 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
MT-CO1P00395 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MT-CO1P00395 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.77■□□□□ 0.28
MT-CO1P00395 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
MT-CO1P00395 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.27
MT-CO1P00395 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.77■□□□□ 0.27
MT-CO1P00395 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
MT-CO1P00395 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.77■□□□□ 0.27
MT-CO1P00395 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.77■□□□□ 0.27
MT-CO1P00395 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
MT-CO1P00395 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
MT-CO1P00395 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.77■□□□□ 0.27
MT-CO1P00395 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
MT-CO1P00395 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
MT-CO1P00395 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MT-CO1P00395 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MT-CO1P00395 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
MT-CO1P00395 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MT-CO1P00395 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MT-CO1P00395 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.76■□□□□ 0.27
MT-CO1P00395 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MT-CO1P00395 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MT-CO1P00395 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
MT-CO1P00395 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.76■□□□□ 0.27
MT-CO1P00395 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
MT-CO1P00395 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MT-CO1P00395 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.76■□□□□ 0.27
MT-CO1P00395 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.76■□□□□ 0.27
MT-CO1P00395 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.76■□□□□ 0.27
MT-CO1P00395 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.76■□□□□ 0.27
MT-CO1P00395 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.76■□□□□ 0.27
MT-CO1P00395 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.76■□□□□ 0.27
MT-CO1P00395 ALG1L8P-201ENST00000533887 760 ntBASIC16.76■□□□□ 0.27
MT-CO1P00395 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.76■□□□□ 0.27
MT-CO1P00395 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.76■□□□□ 0.27
MT-CO1P00395 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MT-CO1P00395 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.76■□□□□ 0.27
MT-CO1P00395 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.76■□□□□ 0.27
MT-CO1P00395 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.76■□□□□ 0.27
MT-CO1P00395 AP001059.3-201ENST00000619053 235 ntBASIC16.76■□□□□ 0.27
MT-CO1P00395 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.76■□□□□ 0.27
MT-CO1P00395 Z92544.3-201ENST00000624747 417 ntBASIC16.76■□□□□ 0.27
MT-CO1P00395 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
MT-CO1P00395 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.76■□□□□ 0.27
MT-CO1P00395 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
MT-CO1P00395 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms