Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.75□□□□□ -0.21
SIX6O95475 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
SIX6O95475 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SIX6O95475 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.74□□□□□ -0.21
SIX6O95475 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
SIX6O95475 AL353593.2-201ENST00000602529 1483 ntBASIC13.74□□□□□ -0.21
SIX6O95475 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
SIX6O95475 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SIX6O95475 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SIX6O95475 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.74□□□□□ -0.21
SIX6O95475 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
SIX6O95475 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SIX6O95475 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SIX6O95475 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
SIX6O95475 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC13.74□□□□□ -0.21
SIX6O95475 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC13.74□□□□□ -0.21
SIX6O95475 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SIX6O95475 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SIX6O95475 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SIX6O95475 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SIX6O95475 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SIX6O95475 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SIX6O95475 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SIX6O95475 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SIX6O95475 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC13.74□□□□□ -0.21
SIX6O95475 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC13.74□□□□□ -0.21
SIX6O95475 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC13.74□□□□□ -0.21
SIX6O95475 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC13.74□□□□□ -0.21
SIX6O95475 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC13.74□□□□□ -0.21
SIX6O95475 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC13.74□□□□□ -0.21
SIX6O95475 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC13.74□□□□□ -0.21
SIX6O95475 REXO2-216ENST00000544196 452 ntTSL 3 BASIC13.74□□□□□ -0.21
SIX6O95475 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
SIX6O95475 LITAF-220ENST00000620789 692 ntTSL 5 BASIC13.74□□□□□ -0.21
SIX6O95475 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SIX6O95475 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.74□□□□□ -0.21
SIX6O95475 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC13.74□□□□□ -0.21
SIX6O95475 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC13.74□□□□□ -0.21
SIX6O95475 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
SIX6O95475 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.74□□□□□ -0.21
SIX6O95475 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.74□□□□□ -0.21
SIX6O95475 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.74□□□□□ -0.21
SIX6O95475 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SIX6O95475 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
SIX6O95475 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
SIX6O95475 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SIX6O95475 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SIX6O95475 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SIX6O95475 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SIX6O95475 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC13.74□□□□□ -0.21
SIX6O95475 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SIX6O95475 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SIX6O95475 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SIX6O95475 AC087481.3-201ENST00000602886 1894 ntBASIC13.74□□□□□ -0.21
SIX6O95475 LINC01101-201ENST00000622953 1884 ntBASIC13.74□□□□□ -0.21
SIX6O95475 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
SIX6O95475 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SIX6O95475 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SIX6O95475 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SIX6O95475 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SIX6O95475 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.73□□□□□ -0.21
SIX6O95475 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
SIX6O95475 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.73□□□□□ -0.21
SIX6O95475 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SIX6O95475 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SIX6O95475 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SIX6O95475 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
SIX6O95475 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SIX6O95475 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
SIX6O95475 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SIX6O95475 HNRNPRP1-201ENST00000453465 1695 ntBASIC13.73□□□□□ -0.21
SIX6O95475 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
SIX6O95475 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC13.73□□□□□ -0.21
SIX6O95475 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.73□□□□□ -0.21
SIX6O95475 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SIX6O95475 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SIX6O95475 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.73□□□□□ -0.21
SIX6O95475 AC092919.2-201ENST00000623631 1645 ntBASIC13.73□□□□□ -0.21
SIX6O95475 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
SIX6O95475 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.73□□□□□ -0.21
SIX6O95475 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SIX6O95475 TSPY14P-201ENST00000303979 915 ntBASIC13.73□□□□□ -0.21
SIX6O95475 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SIX6O95475 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SIX6O95475 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SIX6O95475 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SIX6O95475 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC13.73□□□□□ -0.21
SIX6O95475 RASA4DP-201ENST00000460726 1199 ntBASIC13.73□□□□□ -0.21
SIX6O95475 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SIX6O95475 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC13.73□□□□□ -0.21
SIX6O95475 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SIX6O95475 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SIX6O95475 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC13.73□□□□□ -0.21
SIX6O95475 CD81-212ENST00000526072 1172 ntTSL 5 BASIC13.73□□□□□ -0.21
SIX6O95475 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC13.73□□□□□ -0.21
SIX6O95475 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SIX6O95475 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC13.73□□□□□ -0.21
SIX6O95475 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
SIX6O95475 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC13.73□□□□□ -0.21
SIX6O95475 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms