Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSPG5O95196 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSPG5O95196 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.55■□□□□ 0.4
CSPG5O95196 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSPG5O95196 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.55■□□□□ 0.4
CSPG5O95196 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSPG5O95196 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSPG5O95196 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.55■□□□□ 0.4
CSPG5O95196 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CSPG5O95196 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSPG5O95196 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CSPG5O95196 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CSPG5O95196 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CSPG5O95196 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CSPG5O95196 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CSPG5O95196 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CSPG5O95196 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.54■□□□□ 0.4
CSPG5O95196 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CSPG5O95196 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.54■□□□□ 0.4
CSPG5O95196 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CSPG5O95196 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.54■□□□□ 0.4
CSPG5O95196 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CSPG5O95196 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CSPG5O95196 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
CSPG5O95196 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CSPG5O95196 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CSPG5O95196 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CSPG5O95196 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CSPG5O95196 RPS2P32-201ENST00000439199 892 ntBASIC17.54■□□□□ 0.4
CSPG5O95196 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.54■□□□□ 0.4
CSPG5O95196 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC17.54■□□□□ 0.4
CSPG5O95196 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.54■□□□□ 0.4
CSPG5O95196 KRT17P8-201ENST00000540749 863 ntBASIC17.54■□□□□ 0.4
CSPG5O95196 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC17.54■□□□□ 0.4
CSPG5O95196 RAB43P1-201ENST00000561790 589 ntBASIC17.54■□□□□ 0.4
CSPG5O95196 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17.54■□□□□ 0.4
CSPG5O95196 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.54■□□□□ 0.4
CSPG5O95196 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.54■□□□□ 0.4
CSPG5O95196 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC17.54■□□□□ 0.4
CSPG5O95196 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CSPG5O95196 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CSPG5O95196 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CSPG5O95196 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CSPG5O95196 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
CSPG5O95196 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CSPG5O95196 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.54■□□□□ 0.4
CSPG5O95196 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CSPG5O95196 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CSPG5O95196 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CSPG5O95196 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CSPG5O95196 AC092068.3-201ENST00000587894 2016 ntBASIC17.54■□□□□ 0.4
CSPG5O95196 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CSPG5O95196 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CSPG5O95196 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSPG5O95196 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSPG5O95196 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CSPG5O95196 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.53■□□□□ 0.4
CSPG5O95196 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
CSPG5O95196 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CSPG5O95196 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CSPG5O95196 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSPG5O95196 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSPG5O95196 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSPG5O95196 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSPG5O95196 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSPG5O95196 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSPG5O95196 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSPG5O95196 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.53■□□□□ 0.4
CSPG5O95196 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSPG5O95196 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.53■□□□□ 0.4
CSPG5O95196 TMEM14DP-201ENST00000422205 345 ntBASIC17.53■□□□□ 0.4
CSPG5O95196 DFFBP1-201ENST00000433250 979 ntBASIC17.53■□□□□ 0.4
CSPG5O95196 SLC25A6P5-201ENST00000435663 894 ntBASIC17.53■□□□□ 0.4
CSPG5O95196 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.53■□□□□ 0.4
CSPG5O95196 CD81-207ENST00000481687 890 ntTSL 2 BASIC17.53■□□□□ 0.4
CSPG5O95196 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.53■□□□□ 0.4
CSPG5O95196 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CSPG5O95196 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
CSPG5O95196 AL133215.2-201ENST00000609242 977 ntBASIC17.53■□□□□ 0.4
CSPG5O95196 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CSPG5O95196 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSPG5O95196 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.53■□□□□ 0.4
CSPG5O95196 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.53■□□□□ 0.4
CSPG5O95196 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.53■□□□□ 0.4
CSPG5O95196 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CSPG5O95196 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSPG5O95196 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CSPG5O95196 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.53■□□□□ 0.4
CSPG5O95196 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CSPG5O95196 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CSPG5O95196 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.52■□□□□ 0.4
CSPG5O95196 PP12613-201ENST00000424958 2230 ntBASIC17.52■□□□□ 0.4
CSPG5O95196 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CSPG5O95196 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
CSPG5O95196 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CSPG5O95196 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CSPG5O95196 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.52■□□□□ 0.4
CSPG5O95196 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17.52■□□□□ 0.4
CSPG5O95196 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CSPG5O95196 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms