Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
TRIM3O75382 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM3O75382 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM3O75382 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.31■□□□□ 0.04
TRIM3O75382 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.31■□□□□ 0.04
TRIM3O75382 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.31■□□□□ 0.04
TRIM3O75382 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
TRIM3O75382 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.31■□□□□ 0.04
TRIM3O75382 AC079781.4-201ENST00000641908 219 ntBASIC15.31■□□□□ 0.04
TRIM3O75382 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM3O75382 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM3O75382 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM3O75382 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
TRIM3O75382 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TRIM3O75382 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.31■□□□□ 0.04
TRIM3O75382 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.31■□□□□ 0.04
TRIM3O75382 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM3O75382 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM3O75382 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM3O75382 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TRIM3O75382 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM3O75382 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.31■□□□□ 0.04
TRIM3O75382 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM3O75382 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.31■□□□□ 0.04
TRIM3O75382 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM3O75382 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM3O75382 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM3O75382 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM3O75382 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM3O75382 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM3O75382 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM3O75382 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM3O75382 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM3O75382 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM3O75382 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM3O75382 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
TRIM3O75382 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM3O75382 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM3O75382 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM3O75382 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM3O75382 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM3O75382 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TRIM3O75382 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TRIM3O75382 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM3O75382 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM3O75382 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM3O75382 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM3O75382 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM3O75382 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.3■□□□□ 0.04
TRIM3O75382 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM3O75382 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
TRIM3O75382 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TRIM3O75382 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.3■□□□□ 0.04
TRIM3O75382 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.3■□□□□ 0.04
TRIM3O75382 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.3■□□□□ 0.04
TRIM3O75382 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.3■□□□□ 0.04
TRIM3O75382 CYP2A7P1-201ENST00000595391 815 ntBASIC15.3■□□□□ 0.04
TRIM3O75382 AP001160.2-201ENST00000596071 487 ntBASIC15.3■□□□□ 0.04
TRIM3O75382 AC099522.2-201ENST00000607001 744 ntBASIC15.3■□□□□ 0.04
TRIM3O75382 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.3■□□□□ 0.04
TRIM3O75382 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.3■□□□□ 0.04
TRIM3O75382 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.3■□□□□ 0.04
TRIM3O75382 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM3O75382 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM3O75382 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
TRIM3O75382 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TRIM3O75382 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM3O75382 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM3O75382 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.29■□□□□ 0.04
TRIM3O75382 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TRIM3O75382 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
TRIM3O75382 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM3O75382 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TRIM3O75382 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM3O75382 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.29■□□□□ 0.04
TRIM3O75382 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM3O75382 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.29■□□□□ 0.04
TRIM3O75382 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM3O75382 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
TRIM3O75382 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM3O75382 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM3O75382 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.29■□□□□ 0.04
TRIM3O75382 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM3O75382 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM3O75382 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM3O75382 RNU1-129P-201ENST00000384064 167 ntBASIC15.29■□□□□ 0.04
TRIM3O75382 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.29■□□□□ 0.04
TRIM3O75382 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.29■□□□□ 0.04
TRIM3O75382 AC109635.5-201ENST00000533593 962 ntBASIC15.29■□□□□ 0.04
TRIM3O75382 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.29■□□□□ 0.04
TRIM3O75382 MIR3909-201ENST00000579518 119 ntBASIC15.29■□□□□ 0.04
TRIM3O75382 U1.21-201ENST00000580816 167 ntBASIC15.29■□□□□ 0.04
TRIM3O75382 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TRIM3O75382 AL009183.1-201ENST00000603760 355 ntBASIC15.29■□□□□ 0.04
TRIM3O75382 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
TRIM3O75382 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TRIM3O75382 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM3O75382 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM3O75382 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM3O75382 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms